RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 TK2O00142 265 aa23.18■■□□□ 1.3
CPNE1-217ENST00000439669 HAUS5O94927 633 aa23.18■■□□□ 1.3
CPNE1-217ENST00000439669 ITGB2P05107 769 aa23.18■■□□□ 1.3
CPNE1-217ENST00000439669 MSL3P1P0C860 447 aa23.18■■□□□ 1.3
CPNE1-217ENST00000439669 CUL1Q13616 776 aa23.18■■□□□ 1.3
CPNE1-217ENST00000439669 ZIC1Q15915 447 aa23.18■■□□□ 1.3
CPNE1-217ENST00000439669 DEFB110Q30KQ9 67 aa23.18■■□□□ 1.3
CPNE1-217ENST00000439669 PRAMEF17Q5VTA0 474 aa23.18■■□□□ 1.3
CPNE1-217ENST00000439669 FAM20CQ8IXL6 584 aa23.18■■□□□ 1.3
CPNE1-217ENST00000439669 C2CD4AQ8NCU7 369 aaPredicted RBP23.18■■□□□ 1.3
CPNE1-217ENST00000439669 GIMAP7Q8NHV1 300 aa23.18■■□□□ 1.3
CPNE1-217ENST00000439669 CT55Q8WUE5 264 aa23.18■■□□□ 1.3
CPNE1-217ENST00000439669 CERS2Q96G23 380 aa23.18■■□□□ 1.3
CPNE1-217ENST00000439669 SLC30A3Q99726 388 aa23.18■■□□□ 1.3
CPNE1-217ENST00000439669 SLC7A5P2Q9GIP4 190 aa23.18■■□□□ 1.3
CPNE1-217ENST00000439669 TWSG1Q9GZX9 223 aa23.18■■□□□ 1.3
CPNE1-217ENST00000439669 FAM60AQ9NP50 221 aa23.18■■□□□ 1.3
CPNE1-217ENST00000439669 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.18■■□□□ 1.3
CPNE1-217ENST00000439669 SERTAD3Q9UJW9 196 aa23.18■■□□□ 1.3
CPNE1-217ENST00000439669 MRPS18BQ9Y676 258 aaKnown RBP23.18■■□□□ 1.3
CPNE1-217ENST00000439669 NDC80O14777 642 aa23.17■■□□□ 1.3
CPNE1-217ENST00000439669 NKX2-8O15522 239 aa23.17■■□□□ 1.3
CPNE1-217ENST00000439669 VPS26AO75436 327 aa23.17■■□□□ 1.3
CPNE1-217ENST00000439669 KATNA1O75449 491 aa23.17■■□□□ 1.3
CPNE1-217ENST00000439669 MATN4O95460 622 aa23.17■■□□□ 1.3
CPNE1-217ENST00000439669 PRB1P04280 392 aa23.17■■□□□ 1.3
CPNE1-217ENST00000439669 TCN2P20062 427 aa23.17■■□□□ 1.3
CPNE1-217ENST00000439669 F8A1P23610 371 aa23.17■■□□□ 1.3
CPNE1-217ENST00000439669 RPL21P46778 160 aaKnown RBP23.17■■□□□ 1.3
CPNE1-217ENST00000439669 ITGA1P56199 1179 aa23.17■■□□□ 1.3
CPNE1-217ENST00000439669 MC1RQ01726 317 aa23.17■■□□□ 1.3
CPNE1-217ENST00000439669 DNASE1L3Q13609 305 aa23.17■■□□□ 1.3
CPNE1-217ENST00000439669 LY6DQ14210 128 aa23.17■■□□□ 1.3
CPNE1-217ENST00000439669 LRRC39Q96DD0 335 aa23.17■■□□□ 1.3
CPNE1-217ENST00000439669 GPR21Q99679 349 aa23.17■■□□□ 1.3
CPNE1-217ENST00000439669 AARSD1Q9BTE6 412 aaKnown RBP23.17■■□□□ 1.3
CPNE1-217ENST00000439669 MED16Q9Y2X0 877 aa23.17■■□□□ 1.3
CPNE1-217ENST00000439669 PCDHB3Q9Y5E6 796 aa23.17■■□□□ 1.3
CPNE1-217ENST00000439669 IGSF10Q6WRI0 2623 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 FAM187AA6NFU0 413 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 ARHGEF33A8MVX0 844 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 E7EQ34 232 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 CATP04040 527 aaKnown RBP23.16■■□□□ 1.3
CPNE1-217ENST00000439669 MAGP20916 626 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 CARSP49589 748 aaKnown RBP23.16■■□□□ 1.3
CPNE1-217ENST00000439669 CDC20Q12834 499 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 GPS2Q13227 327 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 SF1Q15637 639 aaKnown RBP23.16■■□□□ 1.3
CPNE1-217ENST00000439669 TBR1Q16650 682 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 C16orf46Q6P387 395 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 ANKMY2Q8IV38 441 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 SPNS2Q8IVW8 549 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 GPR135Q8IZ08 494 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 BBOF1Q8ND07 529 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 INPP5DQ92835 1189 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 MR1Q95460 341 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 CLIP3Q96DZ5 547 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 NDNQ99608 321 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 WDR83Q9BRX9 315 aaKnown RBP23.16■■□□□ 1.3
CPNE1-217ENST00000439669 DPH5Q9H2P9 285 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 ACTR5Q9H9F9 607 aaPredicted RBP23.16■■□□□ 1.3
CPNE1-217ENST00000439669 FAM114A2Q9NRY5 505 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 IRAK4Q9NWZ3 460 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 SPATA7Q9P0W8 599 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 KLHL42Q9P2K6 505 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 SLC17A6Q9P2U8 582 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 KCND3Q9UK17 655 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 KLHL20Q9Y2M5 609 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 TEX264Q9Y6I9 313 aa23.16■■□□□ 1.3
CPNE1-217ENST00000439669 KLK3P07288 261 aaPredicted RBP23.15■■□□□ 1.3
CPNE1-217ENST00000439669 PDIA2Q13087 525 aaKnown RBP23.15■■□□□ 1.3
CPNE1-217ENST00000439669 LINC00303Q3SY05 128 aa23.15■■□□□ 1.3
CPNE1-217ENST00000439669 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.15■■□□□ 1.3
CPNE1-217ENST00000439669 FAM199XQ6PEV8 388 aaPredicted RBP23.15■■□□□ 1.3
CPNE1-217ENST00000439669 NEK10Q6ZWH5 1172 aa23.15■■□□□ 1.3
CPNE1-217ENST00000439669 MAATS1Q7Z4T9 603 aa23.15■■□□□ 1.3
CPNE1-217ENST00000439669 CNTN4Q8IWV2 1026 aa23.15■■□□□ 1.3
CPNE1-217ENST00000439669 CPNE9Q8IYJ1 553 aa23.15■■□□□ 1.3
CPNE1-217ENST00000439669 CD200R1Q8TD46 325 aa23.15■■□□□ 1.3
CPNE1-217ENST00000439669 PLAC1Q9HBJ0 212 aa23.15■■□□□ 1.3
CPNE1-217ENST00000439669 INTS7Q9NVH2 962 aaKnown RBP23.15■■□□□ 1.3
CPNE1-217ENST00000439669 TRMT6Q9UJA5 497 aaKnown RBP23.15■■□□□ 1.3
CPNE1-217ENST00000439669 DHRS7Q9Y394 339 aa23.15■■□□□ 1.3
CPNE1-217ENST00000439669 MGAQ8IWI9 3026 aa23.15■■□□□ 1.3
CPNE1-217ENST00000439669 C21orf140B9A014 251 aa23.14■■□□□ 1.29
CPNE1-217ENST00000439669 TERTO14746 1132 aaKnown RBP23.14■■□□□ 1.29
CPNE1-217ENST00000439669 TP73O15350 636 aa23.14■■□□□ 1.29
CPNE1-217ENST00000439669 RAD51CO43502 376 aa23.14■■□□□ 1.29
CPNE1-217ENST00000439669 PSIP1O75475 530 aaKnown RBP23.14■■□□□ 1.29
CPNE1-217ENST00000439669 OR2B3O76000 313 aa23.14■■□□□ 1.29
CPNE1-217ENST00000439669 ENO3P13929 434 aaPredicted RBP23.14■■□□□ 1.29
CPNE1-217ENST00000439669 OAS2P29728 719 aaKnown RBP23.14■■□□□ 1.29
CPNE1-217ENST00000439669 CALCOCO2Q13137 446 aa23.14■■□□□ 1.29
CPNE1-217ENST00000439669 TRMT10BQ6PF06 316 aaKnown RBP23.14■■□□□ 1.29
CPNE1-217ENST00000439669 KIAA0408Q6ZU52 694 aa23.14■■□□□ 1.29
CPNE1-217ENST00000439669 SLC38A9Q8NBW4 561 aa23.14■■□□□ 1.29
CPNE1-217ENST00000439669 OR9A1PQ8NGU1 263 aa23.14■■□□□ 1.29
CPNE1-217ENST00000439669 DENND1AQ8TEH3 1009 aa23.14■■□□□ 1.29
CPNE1-217ENST00000439669 C16orf45Q96MC5 204 aaPredicted RBP23.14■■□□□ 1.29
CPNE1-217ENST00000439669 CATSPER2Q96P56 530 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms