RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 SLC22A15Q8IZD6 547 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 ZNF781Q8N8C0 355 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 RASGEF1AQ8N9B8 481 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 PDPRQ8NCN5 879 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 FBXO15Q8NCQ5 510 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 OR14C36Q8NHC7 312 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 CEP70Q8NHQ1 597 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 GIMAP7Q8NHV1 300 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 HM13Q8TCT9 377 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 ACTRT2Q8TDY3 377 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 ZNF483Q8TF39 744 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 UBTD2Q8WUN7 234 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 SKA2Q8WVK7 121 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 ASB11Q8WXH4 323 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 FAM3CQ92520 227 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 ELMO1Q92556 727 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 EZH1Q92800 747 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 EXT2Q93063 718 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 NKD1Q969G9 470 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 SKA1Q96BD8 255 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 ERP27Q96DN0 273 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 CMTM5Q96DZ9 223 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 SIPA1Q96FS4 1042 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 COX14Q96I36 57 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 NSL1Q96IY1 281 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 LINC00615Q96LM1 132 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 RMDN2Q96LZ7 410 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 CCDC138Q96M89 665 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 TMEM237Q96Q45 408 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 ZNF382Q96SR6 550 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 CDX2Q99626 313 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 EGFL8Q99944 293 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 DPH2Q9BQC3 489 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 HGH1Q9BTY7 390 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 NUSAP1Q9BXS6 441 aaKnown RBP3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 SLC17A9Q9BYT1 436 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 UNKQ9C0B0 810 aaKnown RBP3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 C20orf27Q9GZN8 174 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 MYLK2Q9H1R3 596 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 OR2AG1Q9H205 316 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 GSTO2Q9H4Y5 243 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 COG4Q9H9E3 785 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 MID1IP1Q9NPA3 183 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 TCF7L2Q9NQB0 619 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 HEBP1Q9NRV9 189 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 PHPT1Q9NRX4 125 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 ABCF3Q9NUQ8 709 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 ARL15Q9NXU5 204 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 OPTCQ9UBM4 332 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 MARCOQ9UEW3 520 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 ZDHHC2Q9UIJ5 367 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 PTBP2Q9UKA9 531 aaKnown RBP3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 CNOT6Q9ULM6 557 aaKnown RBP3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 MMP17Q9ULZ9 603 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 ITM2BQ9Y287 266 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 RRP15Q9Y3B9 282 aaKnown RBP3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 ANGPTL3Q9Y5C1 460 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 ZFC3H1O60293 1989 aaKnown RBP3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 DOCK9Q9BZ29 2069 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 PRUNE2Q8WUY3 3088 aa3.88□□□□□ -1.79
HMGB1P37-201ENST00000439613 TBC1D3DA0A087WVF3 549 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 TBC1D3IA0A087WXS9 549 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 TBC1D3EA0A087X179 549 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 TBC1D3KA0A087X1G2 549 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 A0A1W2PQF6 199 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 A0A1W2PQU0 124 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 SLC5A10A0PJK1 596 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 TBC1D3FA6NER0 549 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 NCF1BA6NI72 391 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 OR2AG2A6NM03 316 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 NCF1CA8MVU1 366 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 CHURC1-FNTBB4DL54 471 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 LOC730098B7Z3J9 87 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 TBC1D3LB9A6J9 549 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 H0YHG0 523 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 K7EPI3 171 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 K7ESM1 405 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 CACNB4O00305 520 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 TOR1BO14657 336 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 CHUKO15111 745 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 INPP4BO15327 924 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 GRID2O43424 1007 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 SGTAO43765 313 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 KATNA1O75449 491 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 PSIP1O75475 530 aaKnown RBP3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 STK16O75716 305 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 POP7O75817 140 aaKnown RBP3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 DNAJC8O75937 253 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 UNC5CO95185 931 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 SIX3O95343 332 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 SOD1P00441 154 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 CATP04040 527 aaKnown RBP3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 ASGR2P07307 311 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 CHRNGP07510 517 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 TBC1D3HP0C7X1 549 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 THRAP10827 490 aa3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 MYCLP1P12525 358 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 NCF1P14598 390 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P37-201ENST00000439613 AOC1P19801 751 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms