RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 UTP6Q9NYH9 597 aaKnown RBP10.11□□□□□ -0.79
MCF2L-216ENST00000439475 TAS2R13Q9NYV9 303 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 WHRNQ9P202 907 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 TRMT6Q9UJA5 497 aaKnown RBP10.11□□□□□ -0.79
MCF2L-216ENST00000439475 CORO1CQ9ULV4 474 aaPredicted RBP10.11□□□□□ -0.79
MCF2L-216ENST00000439475 CHMP2BQ9UQN3 213 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 NFS1Q9Y697 457 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 PCM1Q15154 2024 aa10.11□□□□□ -0.79
MCF2L-216ENST00000439475 USP24Q9UPU5 2620 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 PTPRQQ9UMZ3 2332 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 PABPN1LA6NDY0 278 aaKnown RBP10.1□□□□□ -0.79
MCF2L-216ENST00000439475 TARM1B6A8C7 271 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 EIF3HO15372 352 aaKnown RBP eCLIP10.1□□□□□ -0.791e-6■□□□□ 10.3
MCF2L-216ENST00000439475 URI1O94763 535 aaPredicted RBP10.1□□□□□ -0.79
MCF2L-216ENST00000439475 MATN4O95460 622 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 RECKO95980 971 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 CD63P08962 238 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 TPBGLP0DKB5 382 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 PVRP15151 417 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 CLCN7P51798 805 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 MPP1Q00013 466 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 CAV1Q03135 178 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 DNASE1L3Q13609 305 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 GRB7Q14451 532 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 GBX1Q14549 363 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 ARHGAP19Q14CB8 494 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 MSS51Q4VC12 460 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 CRTC2Q53ET0 693 aaPredicted RBP10.1□□□□□ -0.79
MCF2L-216ENST00000439475 HP1BP3Q5SSJ5 553 aaPredicted RBP10.1□□□□□ -0.79
MCF2L-216ENST00000439475 TLDC1Q6P9B6 456 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 GALNT7Q86SF2 657 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 CNTN4Q8IWV2 1026 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 AGGF1Q8N302 714 aaeCLIP10.1□□□□□ -0.79
MCF2L-216ENST00000439475 C17orf53Q8N3J3 647 aaPredicted RBP10.1□□□□□ -0.79
MCF2L-216ENST00000439475 C2orf73Q8N5S3 287 aaPredicted RBP10.1□□□□□ -0.79
MCF2L-216ENST00000439475 HMGCLL1Q8TB92 370 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 PYROXD1Q8WU10 500 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 MR1Q95460 341 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 TRIM44Q96DX7 344 aaPredicted RBP10.1□□□□□ -0.79
MCF2L-216ENST00000439475 IL17FQ96PD4 163 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 GPR21Q99679 349 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 C17orf62Q9BQA9 187 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 SLC12A9Q9BXP2 914 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 GPR87Q9BY21 358 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 KLHL25Q9H0H3 589 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 ACTR5Q9H9F9 607 aaPredicted RBP10.1□□□□□ -0.79
MCF2L-216ENST00000439475 NSMCE4AQ9NXX6 385 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 TSR3Q9UJK0 312 aaKnown RBP10.1□□□□□ -0.79
MCF2L-216ENST00000439475 CDC23Q9UJX2 597 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 CROTQ9UKG9 612 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 PLCL2Q9UPR0 1127 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 TEX264Q9Y6I9 313 aa10.1□□□□□ -0.79
MCF2L-216ENST00000439475 KIF2AO00139 706 aaPredicted RBP10.09□□□□□ -0.79
MCF2L-216ENST00000439475 MEN1O00255 615 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 RAD51CO43502 376 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 PSIP1O75475 530 aaKnown RBP10.09□□□□□ -0.79
MCF2L-216ENST00000439475 BANF1O75531 89 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 OR2B3O76000 313 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 CCNDBP1O95273 360 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 TIAF1O95411 115 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 AHSGP02765 367 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 HIST1H2AGP0C0S8 130 aaPredicted RBP10.09□□□□□ -0.79
MCF2L-216ENST00000439475 HIST1H2ADP20671 130 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 CMPK1P30085 196 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 CCR10P46092 362 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 BDKRB1P46663 353 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 RPL21P46778 160 aaKnown RBP10.09□□□□□ -0.79
MCF2L-216ENST00000439475 ARSFP54793 590 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 C2orf54Q08AI8 447 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 MGAT5Q09328 741 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 C19orf57Q0VDD7 668 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 PDAP1Q13442 181 aaKnown RBP10.09□□□□□ -0.79
MCF2L-216ENST00000439475 FRG1Q14331 258 aaKnown RBP10.09□□□□□ -0.79
MCF2L-216ENST00000439475 TEDDM1Q5T9Z0 273 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 FAM45BPQ6NSW5 357 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 C16orf46Q6P387 395 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 ZNF549Q6P9A3 640 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 BORAQ6PGQ7 559 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 FIGLAQ6QHK4 219 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 CDHR3Q6ZTQ4 885 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 TRIM73Q86UV7 250 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 ANKMY2Q8IV38 441 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 UNC5BQ8IZJ1 945 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 MYO1HQ8N1T3 1032 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 FBXO15Q8NCQ5 510 aaPredicted RBP10.09□□□□□ -0.79
MCF2L-216ENST00000439475 FBXO36Q8NEA4 188 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 OR1L3Q8NH93 324 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 FAM45AQ8TCE6 357 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 MCOLN3Q8TDD5 553 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 SMPDL3AQ92484 453 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 STARD8Q92502 1023 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 TTC9Q92623 222 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 CDKL2Q92772 493 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 HIST1H2AHQ96KK5 128 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 NRTNQ99748 197 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 HIST1H2AJQ99878 128 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 DPH2Q9BQC3 489 aaPredicted RBP10.09□□□□□ -0.79
MCF2L-216ENST00000439475 H2AFJQ9BTM1 129 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 MENTQ9BUN1 341 aa10.09□□□□□ -0.79
MCF2L-216ENST00000439475 TWSG1Q9GZX9 223 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms