RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 TCAIMQ8N3R3 496 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.72□□□□□ -0.857e-6■■■■■ 27.5
CDC42SE1-202ENST00000439374 DPH2Q9BQC3 489 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 TMEM246Q9BRR3 403 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 IRF2BPLQ9H1B7 796 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 ZNF385DQ9H6B1 395 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 TMEM248Q9NWD8 314 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 ERVK-11Q9UQG0 969 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 OAS3Q9Y6K5 1087 aaKnown RBP9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 ANKRD34BA5PLL1 514 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 TARM1B6A8C7 271 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 COCHO43405 550 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 FCGR1AP12314 374 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 IGFBP5P24593 272 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 PBLDP30039 288 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 STC1P52823 247 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 SREBF2Q12772 1141 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 PRKG2Q13237 762 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 ARMC4Q5T2S8 1044 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 FAM180BQ6P0A1 224 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 NECAB2Q7Z6G3 386 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 MRPL10Q7Z7H8 261 aaKnown RBP9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 SYVN1Q86TM6 617 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 EID3Q8N140 333 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 RNF175Q8N4F7 328 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 OR2T11Q8NH01 316 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 TMEM203Q969S6 136 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 CDK5RAP1Q96SZ6 601 aaKnown RBP9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 HOPXQ9BPY8 73 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 AARSD1Q9BTE6 412 aaKnown RBP9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 MMP28Q9H239 520 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 UCKL1Q9NWZ5 548 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 SCN3BQ9NY72 215 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 PDP1Q9P0J1 537 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 PARP14Q460N5 1801 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 TMEM88BA6NKF7 163 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 AQP12BA6NM10 295 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 SMLR1H3BR10 107 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 AIREO43918 545 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 SCO1O75880 301 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 SLC25A14O95258 325 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 APOA1P02647 267 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 HTR1AP08908 422 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 S100A1P23297 94 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 CD40LGP29965 261 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 ALDH3A2P51648 485 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 HTRA3P83110 453 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 MVKQ03426 396 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 LCP2Q13094 533 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 VEPH1Q14D04 833 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 OXA1LQ15070 435 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 MAPKAPK3Q16644 382 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 PARP15Q460N3 678 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 AQP12AQ8IXF9 295 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 CAMKK1Q8N5S9 505 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 TOP1MTQ969P6 601 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 LGALS12Q96DT0 336 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 REXO5Q96IC2 774 aaKnown RBP9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 DHRS1Q96LJ7 313 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 UROC1Q96N76 676 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 ADGRE3Q9BY15 652 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 NUAK2Q9H093 628 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 LEF1Q9UJU2 399 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 TMEM98Q9Y2Y6 226 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 CACNA1CQ13936 2221 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 FAM47E-STBD1D6RA91 191 aa9.71□□□□□ -0.85
CDC42SE1-202ENST00000439374 PRAMEF11O60813 436 aa9.71□□□□□ -0.85
CDC42SE1-202ENST00000439374 TNFRSF21O75509 655 aa9.71□□□□□ -0.85
CDC42SE1-202ENST00000439374 KLKB1P03952 638 aa9.71□□□□□ -0.85
CDC42SE1-202ENST00000439374 CYP11A1P05108 521 aa9.71□□□□□ -0.85
CDC42SE1-202ENST00000439374 BNIP2Q12982 314 aa9.71□□□□□ -0.85
CDC42SE1-202ENST00000439374 CYP4Z1Q86W10 505 aa9.71□□□□□ -0.85
CDC42SE1-202ENST00000439374 NLGN4XQ8N0W4 816 aa9.71□□□□□ -0.85
CDC42SE1-202ENST00000439374 ZNF366Q8N895 744 aa9.71□□□□□ -0.85
CDC42SE1-202ENST00000439374 TP53I13Q8NBR0 393 aaPredicted RBP9.71□□□□□ -0.85
CDC42SE1-202ENST00000439374 OR56A4Q8NGH8 313 aa9.71□□□□□ -0.85
CDC42SE1-202ENST00000439374 ZNF420Q8TAQ5 688 aaPredicted RBP9.71□□□□□ -0.85
CDC42SE1-202ENST00000439374 PTCD2Q8WV60 388 aaKnown RBP9.71□□□□□ -0.85
CDC42SE1-202ENST00000439374 TMEM169Q96HH4 297 aa9.71□□□□□ -0.85
CDC42SE1-202ENST00000439374 SLC22A12Q96S37 553 aa9.71□□□□□ -0.85
CDC42SE1-202ENST00000439374 EBPLQ9BY08 206 aa9.71□□□□□ -0.85
CDC42SE1-202ENST00000439374 IPPKQ9H8X2 491 aa9.71□□□□□ -0.85
CDC42SE1-202ENST00000439374 INTS10Q9NVR2 710 aaKnown RBP9.71□□□□□ -0.85
CDC42SE1-202ENST00000439374 KLHL20Q9Y2M5 609 aa9.71□□□□□ -0.85
CDC42SE1-202ENST00000439374 SAMHD1Q9Y3Z3 626 aaKnown RBP9.71□□□□□ -0.85
CDC42SE1-202ENST00000439374 UNCXA6NJT0 531 aa9.71□□□□□ -0.86
CDC42SE1-202ENST00000439374 CTDSP2O14595 271 aa9.71□□□□□ -0.86
CDC42SE1-202ENST00000439374 ADAMTS4O75173 837 aa9.71□□□□□ -0.86
CDC42SE1-202ENST00000439374 CLDN7O95471 211 aa9.71□□□□□ -0.86
CDC42SE1-202ENST00000439374 PRAMEF1O95521 474 aa9.71□□□□□ -0.86
CDC42SE1-202ENST00000439374 CAP1Q01518 475 aa9.71□□□□□ -0.86
CDC42SE1-202ENST00000439374 ZFP69Q49AA0 526 aa9.71□□□□□ -0.86
CDC42SE1-202ENST00000439374 RFTN2Q52LD8 501 aaPredicted RBP9.71□□□□□ -0.86
CDC42SE1-202ENST00000439374 INTS11Q5TA45 600 aaKnown RBP9.71□□□□□ -0.86
CDC42SE1-202ENST00000439374 TTC23Q5W5X9 447 aa9.71□□□□□ -0.86
CDC42SE1-202ENST00000439374 ZCCHC8Q6NZY4 707 aaKnown RBP9.71□□□□□ -0.86
CDC42SE1-202ENST00000439374 OTOP2Q7RTS6 562 aa9.71□□□□□ -0.86
CDC42SE1-202ENST00000439374 PPP1R2P1Q96PQ5 205 aa9.71□□□□□ -0.86
CDC42SE1-202ENST00000439374 TSPAN18Q96SJ8 248 aa9.71□□□□□ -0.86
CDC42SE1-202ENST00000439374 WDR12Q9GZL7 423 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms