RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 FBLIM1Q8WUP2 373 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 PIH1D2Q8WWB5 315 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 EGFL8Q99944 293 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 APOL5Q9BWW9 433 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 GKN1Q9NS71 199 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 ENPP5Q9UJA9 477 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 C3orf18Q9UK00 162 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 ZNF490Q9ULM2 529 aaPredicted RBP16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 SH3GLB1Q9Y371 365 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 SCN8AQ9UQD0 1980 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 MYO7AQ13402 2215 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 LOC100130705A0A1B0GUX0 176 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 J3QRK9 145 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 SLC1A7O00341 560 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 AREL1O15033 823 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 SULT1C4O75897 302 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 SLC25A14O95258 325 aaPredicted RBP16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 PGLSO95336 258 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 HOXB6P17509 224 aaKnown RBP16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 AGXTP21549 392 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 KCNC4Q03721 635 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 IL18R1Q13478 541 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 AQP6Q13520 282 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 SPIDRQ14159 915 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 NR1D2Q14995 579 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 ZC3H12BQ5HYM0 836 aaKnown RBP16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 LRIF1Q5T3J3 769 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 ZBTB46Q86UZ6 589 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 ZBTB2Q8N680 514 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 POP5Q969H6 163 aaKnown RBP16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 WBP2Q969T9 261 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 NCLNQ969V3 563 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 FBXL8Q96CD0 374 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 OR52E6Q96RD3 313 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 FUNDC2Q9BWH2 189 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 SLC29A3Q9BZD2 475 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 SLC6A13Q9NSD5 602 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 AFF4Q9UHB7 1163 aaKnown RBP16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 TMEFF2Q9UIK5 374 aaPredicted RBP16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 MAN2B2Q9Y2E5 1009 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 COQ6Q9Y2Z9 468 aa16.01■□□□□ 0.15
CLCNKA-203ENST00000439316 TRBV5-4A0A0C4DH59 114 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 SOBPA7XYQ1 873 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 BOLA2-SMG1P6H3BVE0 249 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 SLC16A6O15403 523 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 HS6ST1O60243 411 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 SEC22BO75396 215 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 ERN1O75460 977 aaKnown RBP16■□□□□ 0.15
CLCNKA-203ENST00000439316 ABLIM3O94929 683 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 LINC00271P0C7V0 271 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 OCM2P0CE71 109 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 OCMP0CE72 109 aaPredicted RBP16■□□□□ 0.15
CLCNKA-203ENST00000439316 PCMT1P22061 227 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 HTR1BP28222 390 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 MZF1P28698 734 aaPredicted RBP16■□□□□ 0.15
CLCNKA-203ENST00000439316 PPM1AP35813 382 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 TUFMP49411 452 aaKnown RBP16■□□□□ 0.15
CLCNKA-203ENST00000439316 PHEXP78562 749 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 GSTM4Q03013 218 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 PIGFQ07326 219 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 NFATC2Q13469 925 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 SPCS2Q15005 226 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 RFX4Q33E94 735 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 ATXN7L2Q5T6C5 722 aaPredicted RBP16■□□□□ 0.15
CLCNKA-203ENST00000439316 GPRC6AQ5T6X5 926 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 ARMC12Q5T9G4 340 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 GCNT7Q6ZNI0 430 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 SNX20Q7Z614 316 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 PHACTR4Q8IZ21 702 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 CHPFQ8IZ52 775 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 ZNF566Q969W8 418 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 TNKS2Q9H2K2 1166 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 RDH14Q9HBH5 336 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 C1orf109Q9NX04 203 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 FCF1Q9Y324 198 aaKnown RBP16■□□□□ 0.15
CLCNKA-203ENST00000439316 INSL6Q9Y581 213 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 A0A096LPI6 279 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 CARNS1A5YM72 827 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 LOC730098B7Z3J9 87 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 CFAP99D6REC4 459 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 H0Y626 953 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 FGF18O76093 207 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 ARHGEF15O94989 841 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 TRIM16O95361 564 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 SERPINA1P01009 418 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 IRF1P10914 325 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 ITGAMP11215 1152 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 BCKDHAP12694 445 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 HOXB9P17482 250 aaPredicted RBP16■□□□□ 0.15
CLCNKA-203ENST00000439316 ITGALP20701 1170 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 RYKP34925 604 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 PSMD7P51665 324 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 AP1S1P61966 158 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 PHC1P78364 1004 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 PSRC1Q6PGN9 363 aaPredicted RBP16■□□□□ 0.15
CLCNKA-203ENST00000439316 DCP2Q8IU60 420 aaKnown RBP16■□□□□ 0.15
CLCNKA-203ENST00000439316 HOMEZQ8IX15 550 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 CCDC138Q96M89 665 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 C19orf43Q9BQ61 176 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 KCNH6Q9H252 994 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms