RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 SIGIRRQ6IA17 410 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 PLEKHM3Q6ZWE6 761 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 LRRC8DQ7L1W4 858 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 FASTKD5Q7L8L6 764 aaKnown RBP2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 SH2D6Q7Z4S9 175 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 HAPLN4Q86UW8 402 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 GPR180Q86V85 440 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 MAP7D3Q8IWC1 876 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 SPAG16Q8N0X2 631 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 ZNF653Q96CK0 615 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 ARHGEF26Q96DR7 871 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 LINC00479Q96M42 142 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 NEUROD6Q96NK8 337 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 OPRPNQ99935 248 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 PDZD7Q9H5P4 517 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 PRMT8Q9NR22 394 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 TCP11L1Q9NUJ3 509 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 PAK5Q9P286 719 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 MARCH4Q9P2E8 410 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 FBXL2Q9UKC9 423 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 CEPT1Q9Y6K0 416 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 PKDREJQ9NTG1 2253 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 ABCA7Q8IZY2 2146 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 MROH7-TTC4A0A0A0MT08 1334 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 ABCC4O15439 1325 aa2.63□□□□□ -1.99
HMGB1P18-201ENST00000438801 GON4LQ3T8J9 2241 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 LNP1A1A4G5 178 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 NDUFAF8A1L188 74 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 VCYO14598 125 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 ARHGEF9O43307 516 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 COX7A2P14406 83 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 AZU1P20160 251 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 HOXC9P31274 260 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 NRIP1P48552 1158 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 TRAPPC10P48553 1259 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 GNAQP50148 359 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 CLDN20P56880 219 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 UFM1P61960 85 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 IRX6P78412 446 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 COG7P83436 770 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 UBE3AQ05086 875 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 ITGA9Q13797 1035 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 DECR1Q16698 335 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 DCST1Q5T197 706 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 C18orf63Q68DL7 685 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 NRROSQ86YC3 692 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 MARCH9Q86YJ5 346 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 ZNF473Q8WTR7 871 aaKnown RBP2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 TAAR8Q969N4 342 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 ZNF689Q96CS4 500 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 KLHL15Q96M94 604 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 GLT1D1Q96MS3 346 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 MXD3Q9BW11 206 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 PLA2G12AQ9BZM1 189 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 WDR13Q9H1Z4 485 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 ERVMER34-1Q9H9K5 563 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 ACSS1Q9NUB1 689 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 ZDHHC18Q9NUE0 388 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 C2orf42Q9NWW7 574 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 ADPRHL2Q9NX46 363 aa2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 SLC25A10Q9UBX3 287 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P18-201ENST00000438801 SMCHD1A6NHR9 2005 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 ZNF469Q96JG9 3925 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 A0A087X002 238 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 A0A0J9YWU9 116 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 USP17L23D6RBM5 183 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 SH2B2O14492 632 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 BBOX1O75936 387 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 BAIAP3O94812 1187 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 NR3C1P04150 777 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 HOXB5P09067 269 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 HOXA13P31271 388 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 NR2C2P49116 596 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 MLLT10P55197 1068 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 DEFB103AP81534 67 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 ACVR2BQ13705 512 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 TMEM187Q14656 261 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 MYLK3Q32MK0 819 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 USP41Q3LFD5 358 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 C6orf141Q5SZD1 244 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 DCLRE1AQ6PJP8 1040 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 SUSD1Q6UWL2 747 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 ANO5Q75V66 913 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 CACNA2D4Q7Z3S7 1137 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 PIWIL4Q7Z3Z4 852 aaKnown RBP2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 SPATA5Q8NB90 893 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 SLC44A1Q8WWI5 657 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 TMEM158Q8WZ71 300 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 NDRG1Q92597 394 aaKnown RBP2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 USP6NLQ92738 828 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 APBB2Q92870 758 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 SENP5Q96HI0 755 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 POM121L2Q96KW2 1035 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 ZSCAN31Q96LW9 406 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 TRIM15Q9C019 465 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 LRMDAQ9H2I8 198 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 POMKQ9H5K3 350 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 FGF22Q9HCT0 170 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 INTS10Q9NVR2 710 aaKnown RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms