RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 PDE10AQ9Y233 779 aa6.86□□□□□ -1.31
LSM3P3-201ENST00000436601 WDR37Q9Y2I8 494 aa6.86□□□□□ -1.31
LSM3P3-201ENST00000436601 CORINQ9Y5Q5 1042 aa6.86□□□□□ -1.31
LSM3P3-201ENST00000436601 DGKBQ9Y6T7 804 aa6.86□□□□□ -1.31
LSM3P3-201ENST00000436601 ATXN2Q99700 1313 aaKnown RBP6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 COL6A3P12111 3177 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 KRT87PA6NCN2 255 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 A8MT66 165 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 ARHGEF33A8MVX0 844 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 SLC16A5O15375 505 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 BCAT2O15382 392 aaPredicted RBP6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 TRIM13O60858 407 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 PSIP1O75475 530 aaKnown RBP6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 RASGRP1O95267 797 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 EML2O95834 649 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 TNFP01375 233 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 C8GP07360 202 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 TPBGLP0DKB5 382 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 VSIG8P0DPA2 414 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 VCLP18206 1134 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 TAC1P20366 129 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 ATP5F1P24539 256 aaPredicted RBP6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 AK4P27144 223 aaPredicted RBP6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 CNR2P34972 360 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 DHPSP49366 369 aaPredicted RBP6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 CLCNKAP51800 687 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 PRKAA2P54646 552 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 DNAJB13P59910 316 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 GNGT1P63211 74 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 BNC1Q01954 994 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 SRSF11Q05519 484 aaKnown RBP6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 LRP8Q14114 963 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 TCEA2Q15560 299 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 TGFBIQ15582 683 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 CHI3L2Q15782 390 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 ZXDCQ2QGD7 858 aaPredicted RBP6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 CCSMST1Q4G0I0 132 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 ZC3H12BQ5HYM0 836 aaKnown RBP6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 LYSMD4Q5XG99 296 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 CAPRIN2Q6IMN6 1127 aaKnown RBP6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 VHLLQ6RSH7 139 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 ATG14Q6ZNE5 492 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 RGS9BPQ6ZS82 235 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 UBE2R2Q712K3 238 aaPredicted RBP6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 ADAMTSL2Q86TH1 951 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 TAX1BP1Q86VP1 789 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 PARGQ86W56 976 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 NRROSQ86YC3 692 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 NUDCD3Q8IVD9 361 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 CFAP61Q8NHU2 1237 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 SKA2Q8WVK7 121 aaPredicted RBP6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 DYDC1Q8WWB3 177 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 ZNF75CPQ92670 426 aaPredicted RBP6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 EXT2Q93063 718 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 RMDN2Q96LZ7 410 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 MAGEB18Q96M61 343 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 COL25A1Q9BXS0 654 aaPredicted RBP6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 ZDHHC5Q9C0B5 715 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 C20orf27Q9GZN8 174 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 WWP1Q9H0M0 922 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 CCDC134Q9H6E4 229 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 MANSC1Q9H8J5 431 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 PARVBQ9HBI1 364 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 PRDM8Q9NQV8 689 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 ACSS2Q9NR19 701 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 TRNAU1APQ9NX07 287 aaKnown RBP6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 UTP6Q9NYH9 597 aaKnown RBP6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 TBC1D29Q9UFV1 150 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 MID2Q9UJV3 735 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 PILRBQ9UKJ0 227 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 ACSL5Q9ULC5 683 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 RNF112Q9ULX5 631 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 PSMD13Q9UNM6 376 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 OARD1Q9Y530 152 aa6.85□□□□□ -1.31
LSM3P3-201ENST00000436601 LOC100289279A0A1B0GTE1 492 aa6.84□□□□□ -1.31
LSM3P3-201ENST00000436601 A0A1B0GVT2 93 aa6.84□□□□□ -1.31
LSM3P3-201ENST00000436601 A6NCN8 305 aa6.84□□□□□ -1.31
LSM3P3-201ENST00000436601 LRRC14BA6NHZ5 514 aa6.84□□□□□ -1.31
LSM3P3-201ENST00000436601 NCF1BA6NI72 391 aaPredicted RBP6.84□□□□□ -1.31
LSM3P3-201ENST00000436601 SYCE1LA8MT33 242 aa6.84□□□□□ -1.31
LSM3P3-201ENST00000436601 NCF1CA8MVU1 366 aaPredicted RBP6.84□□□□□ -1.31
LSM3P3-201ENST00000436601 B2RBV5 119 aa6.84□□□□□ -1.31
LSM3P3-201ENST00000436601 TCP11X1B4DZS4 312 aa6.84□□□□□ -1.31
LSM3P3-201ENST00000436601 SUPT3HB4E1H0 165 aa6.84□□□□□ -1.31
LSM3P3-201ENST00000436601 M0R082 166 aa6.84□□□□□ -1.31
LSM3P3-201ENST00000436601 TM4SF5O14894 197 aa6.84□□□□□ -1.31
LSM3P3-201ENST00000436601 KLF11O14901 512 aa6.84□□□□□ -1.31
LSM3P3-201ENST00000436601 TAPBPO15533 448 aa6.84□□□□□ -1.31
LSM3P3-201ENST00000436601 FFAR2O15552 330 aa6.84□□□□□ -1.31
LSM3P3-201ENST00000436601 ITM2AO43736 263 aa6.84□□□□□ -1.31
LSM3P3-201ENST00000436601 SNX2O60749 519 aa6.84□□□□□ -1.31
LSM3P3-201ENST00000436601 SHOX2O60902 331 aaPredicted RBP6.84□□□□□ -1.31
LSM3P3-201ENST00000436601 SMIM24O75264 130 aa6.84□□□□□ -1.31
LSM3P3-201ENST00000436601 SUPT3HO75486 399 aa6.84□□□□□ -1.31
LSM3P3-201ENST00000436601 IPO13O94829 963 aaKnown RBP6.84□□□□□ -1.31
LSM3P3-201ENST00000436601 SIX3O95343 332 aaPredicted RBP6.84□□□□□ -1.31
LSM3P3-201ENST00000436601 C1orf105O95561 183 aa6.84□□□□□ -1.31
LSM3P3-201ENST00000436601 CSF2P04141 144 aa6.84□□□□□ -1.31
LSM3P3-201ENST00000436601 CELA2BP08218 269 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms