RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 LYPLAL1Q5VWZ2 237 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 RHBDD2Q6NTF9 364 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 TMEM214Q6NUQ4 689 aaKnown RBP9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 AFTPHQ6ULP2 937 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 ZNF534Q76KX8 674 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 GPR135Q8IZ08 494 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 SLC22A15Q8IZD6 547 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 TXLNBQ8N3L3 684 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 ZBTB2Q8N680 514 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 TMEM102Q8N9M5 508 aaPredicted RBP9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 GLIS1Q8NBF1 620 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 GALNT11Q8NCW6 608 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 FDCSPQ8NFU4 85 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 PEX13Q92968 403 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 HDAC10Q969S8 669 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 SGSM3Q96HU1 749 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 ZNF778Q96MU6 729 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 GBP5Q96PP8 586 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 PSMG3-AS1Q96PY0 264 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 ALS2CR12Q96Q35 445 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 RANBP9Q96S59 729 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 DHRS4Q9BTZ2 278 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 MENTQ9BUN1 341 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 FRMD8P1Q9BZ68 369 aaPredicted RBP9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 SLC2A6Q9UGQ3 507 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 POLG2Q9UHN1 485 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 AP1M2Q9Y6Q5 423 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 CENPEQ02224 2701 aa9.08□□□□□ -0.96
CDC42-IT1-201ENST00000431803 SHANK1Q9Y566 2161 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 A0A0J9YY10 115 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 C9J4A7 227 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 ZSCAN9O15535 394 aaPredicted RBP9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 GOT2P00505 430 aaKnown RBP9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 CTSBP07858 339 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 OR56A5P0C7T3 313 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 GP1BBP13224 206 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 AGXTP21549 392 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 PEBP1P30086 187 aaKnown RBP9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 PKLRP30613 574 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 CCR7P32248 378 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 FDFT1P37268 417 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 GRIA1P42261 906 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 UQCRFS1P47985 274 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 ATP1A4Q13733 1029 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 KIR2DS3Q14952 304 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 BRD3Q15059 726 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 TLR1Q15399 786 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 SLC5A12Q1EHB4 618 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 DEFB110Q30KQ9 67 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 SYTL3Q4VX76 610 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 TSTD2Q5T7W7 516 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 NAPRTQ6XQN6 538 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 MED25Q71SY5 747 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 MRGPREQ86SM8 312 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 HOOK3Q86VS8 718 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 HPS6Q86YV9 775 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 DNAJC22Q8N4W6 341 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 RNF10Q8N5U6 811 aaKnown RBP9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 DNAAF3Q8N9W5 541 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 Q8NA96 180 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 CPT1CQ8TCG5 803 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 PROKR1Q8TCW9 393 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 SMAD5Q99717 465 aaKnown RBP9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 C17orf62Q9BQA9 187 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 NUDT9Q9BW91 350 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 SPRTNQ9H040 489 aaPredicted RBP9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 CASS4Q9NQ75 786 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 CDYLQ9Y232 598 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 PADI2Q9Y2J8 665 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 TDRKHQ9Y2W6 561 aaKnown RBP9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 TCAF1Q9Y4C2 921 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 ZNF451Q9Y4E5 1061 aa9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 SNRNP200O75643 2136 aaKnown RBP9.07□□□□□ -0.96
CDC42-IT1-201ENST00000431803 DOPEY1Q5JWR5 2465 aa9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 F8W8V4 182 aa9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 KDM1AO60341 852 aa9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 GPC4O75487 556 aa9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 GAS8O95995 478 aa9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 IFNB1P01574 187 aa9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 CBSLP0DN79 551 aa9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 ADRA1DP25100 572 aa9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 CBSP35520 551 aa9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 RAB28P51157 221 aa9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 RRADP55042 308 aa9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 SEMA3AQ14563 771 aa9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 DNAJC21Q5F1R6 531 aaKnown RBP9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 CRYBG3Q68DQ2 2970 aa9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 JMJD6Q6NYC1 403 aaPredicted RBP9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 TLDC1Q6P9B6 456 aa9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 PPP1R21Q6ZMI0 780 aa9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 NLRP9Q7RTR0 991 aa9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 GAS2L3Q86XJ1 694 aa9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 RAB43Q86YS6 212 aa9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 SLC13A5Q86YT5 568 aaPredicted RBP9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 VRK3Q8IV63 474 aa9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 RBMXL3Q8N7X1 1067 aaKnown RBP9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 LINC01555Q8NAE3 123 aa9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 OR2Y1Q8NGV0 311 aa9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 OR4L1Q8NH43 312 aa9.06□□□□□ -0.96
CDC42-IT1-201ENST00000431803 LKAAEAR1Q8TD35 194 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms