RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 TBX10O75333 385 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 SLC22A3O75751 556 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 SIX3O95343 332 aaPredicted RBP1.97□□□□□ -2.09
CDC40-204ENST00000431461 WDPCPO95876 746 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 IGHV4-59P01825 116 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 CENPBP07199 599 aaPredicted RBP1.97□□□□□ -2.09
CDC40-204ENST00000431461 TSPY3P0CV98 308 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 TSPY8P0CW00 308 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 EPCAMP16422 314 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 EPORP19235 508 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 MSH3P20585 1137 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 CPT2P23786 658 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 MARK3P27448 753 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 CDC25CP30307 473 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 DCTP40126 519 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 MNDAP41218 407 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 RPL21P46778 160 aaKnown RBP1.97□□□□□ -2.09
CDC40-204ENST00000431461 LHX1P48742 406 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 CDH13P55290 713 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 RBPJQ06330 500 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 LGALS3BPQ08380 585 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 PNRC1Q12796 327 aaPredicted RBP1.97□□□□□ -2.09
CDC40-204ENST00000431461 GPR17Q13304 367 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 FCN2Q15485 313 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 UGCGQ16739 394 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 HYAL4Q2M3T9 481 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 KIAA1644Q3SXP7 199 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 C14orf177Q52M58 125 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 C1orf141Q5JVX7 400 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 SLC35D3Q5M8T2 416 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 LCE1BQ5T7P3 118 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 ZNF772Q68DY9 489 aaPredicted RBP1.97□□□□□ -2.09
CDC40-204ENST00000431461 FAAP20Q6NZ36 180 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 RPUSD3Q6P087 351 aaKnown RBP1.97□□□□□ -2.09
CDC40-204ENST00000431461 TRIM65Q6PJ69 517 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 TMED8Q6PL24 325 aaPredicted RBP1.97□□□□□ -2.09
CDC40-204ENST00000431461 ENPP7Q6UWV6 458 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 MSANTD1Q6ZTZ1 278 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 G2E3Q7L622 706 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 SH2D6Q7Z4S9 175 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 TLK2Q86UE8 772 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 AACSQ86V21 672 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 MYPOPQ86VE0 399 aaPredicted RBP1.97□□□□□ -2.09
CDC40-204ENST00000431461 CFAP206Q8IYR0 622 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 IQUBQ8NA54 791 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 CAMKVQ8NCB2 501 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 KLHDC9Q8NEP7 349 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 OR1J1Q8NGS3 322 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 OR2AJ1Q8NGZ0 328 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 PHLDA1Q8WV24 401 aaPredicted RBP1.97□□□□□ -2.09
CDC40-204ENST00000431461 IRGQQ8WZA9 623 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 SUSD6Q92537 303 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 GIMAP5Q96F15 307 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 RHNO1Q9BSD3 238 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 PRRG4Q9BZD6 226 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 BARHL1Q9BZE3 327 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 GPR88Q9GZN0 384 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 CPVLQ9H3G5 476 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 FN3KQ9H479 309 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 BICC1Q9H694 974 aaKnown RBP1.97□□□□□ -2.09
CDC40-204ENST00000431461 ZWILCHQ9H900 591 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 CNOT10Q9H9A5 744 aaKnown RBP1.97□□□□□ -2.09
CDC40-204ENST00000431461 CDH20Q9HBT6 801 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 ZNF701Q9NV72 531 aaPredicted RBP1.97□□□□□ -2.09
CDC40-204ENST00000431461 RHCGQ9UBD6 479 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 LEF1Q9UJU2 399 aaPredicted RBP1.97□□□□□ -2.09
CDC40-204ENST00000431461 GAB2Q9UQC2 676 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 PADI2Q9Y2J8 665 aa1.97□□□□□ -2.09
CDC40-204ENST00000431461 TRAV24A0A0B4J272 114 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 TEX13DA0A0J9YY54 714 aaPredicted RBP1.96□□□□□ -2.1
CDC40-204ENST00000431461 LOC101059948A0A1B0GTJ6 334 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 HTR3EA5X5Y0 456 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 TMEM221A6NGB7 291 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 ANKRD61A6NGH8 418 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 PMS2P5A8MQ11 134 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 H0YAE9 185 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 PLOD2O00469 737 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 PTGESO14684 152 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 IFIT3O14879 490 aaKnown RBP1.96□□□□□ -2.1
CDC40-204ENST00000431461 ARPC2O15144 300 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 EPHB6O15197 1021 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 OR10H2O60403 315 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 GLRA3O75311 464 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 RPS6KA5O75582 802 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 DFFBO76075 338 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 WISP2O76076 250 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 GCNT3O95395 438 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 ATP5BP06576 529 aaKnown RBP1.96□□□□□ -2.1
CDC40-204ENST00000431461 CFC1BP0CG36 223 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 CFC1P0CG37 223 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 GP1BBP13224 206 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 ACHEP22303 614 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 PTAFRP25105 342 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 PTPN3P26045 913 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 EPHA2P29317 976 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 GABRA5P31644 462 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 SOAT1P35610 550 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 MAGEA11P43364 429 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 THOP1P52888 689 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms