RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 CCDC154A6NI56 674 aa16.21■□□□□ 0.19
USHBP1-203ENST00000431146 E7EQ34 232 aa16.21■□□□□ 0.19
USHBP1-203ENST00000431146 SLC28A1O00337 649 aa16.21■□□□□ 0.19
USHBP1-203ENST00000431146 PAK4O96013 591 aaPredicted RBP16.21■□□□□ 0.19
USHBP1-203ENST00000431146 ADH1BP00325 375 aa16.21■□□□□ 0.19
USHBP1-203ENST00000431146 RPSAP08865 295 aaKnown RBP16.21■□□□□ 0.19
USHBP1-203ENST00000431146 MRPS22P82650 360 aaKnown RBP16.21■□□□□ 0.19
USHBP1-203ENST00000431146 CDK3Q00526 305 aa16.21■□□□□ 0.19
USHBP1-203ENST00000431146 TSTA3Q13630 321 aaPredicted RBP16.21■□□□□ 0.19
USHBP1-203ENST00000431146 FGL2Q14314 439 aa16.21■□□□□ 0.19
USHBP1-203ENST00000431146 IER5LQ5T953 404 aa16.21■□□□□ 0.19
USHBP1-203ENST00000431146 TRIM46Q7Z4K8 759 aa16.21■□□□□ 0.19
USHBP1-203ENST00000431146 C11orf96Q7Z7L8 435 aa16.21■□□□□ 0.19
USHBP1-203ENST00000431146 ROPN1LQ96C74 230 aa16.21■□□□□ 0.19
USHBP1-203ENST00000431146 COX14Q96I36 57 aa16.21■□□□□ 0.19
USHBP1-203ENST00000431146 PPP3R2Q96LZ3 170 aa16.21■□□□□ 0.19
USHBP1-203ENST00000431146 OR4K3Q96R72 315 aa16.21■□□□□ 0.19
USHBP1-203ENST00000431146 SH3GL3Q99963 347 aa16.21■□□□□ 0.19
USHBP1-203ENST00000431146 SLC29A3Q9BZD2 475 aa16.21■□□□□ 0.19
USHBP1-203ENST00000431146 ELOVL6Q9H5J4 265 aa16.21■□□□□ 0.19
USHBP1-203ENST00000431146 NMRK1Q9NWW6 199 aa16.21■□□□□ 0.19
USHBP1-203ENST00000431146 FBXL12Q9NXK8 326 aa16.21■□□□□ 0.19
USHBP1-203ENST00000431146 ZIM2Q9NZV7 527 aa16.21■□□□□ 0.19
USHBP1-203ENST00000431146 TMEM181Q9P2C4 612 aa16.21■□□□□ 0.19
USHBP1-203ENST00000431146 MYO10Q9HD67 2058 aa16.21■□□□□ 0.19
USHBP1-203ENST00000431146 FXYD1O00168 92 aa16.21■□□□□ 0.18
USHBP1-203ENST00000431146 ACOT8O14734 319 aa16.21■□□□□ 0.18
USHBP1-203ENST00000431146 LIN7AO14910 233 aaPredicted RBP16.21■□□□□ 0.18
USHBP1-203ENST00000431146 DNAJA2O60884 412 aa16.21■□□□□ 0.18
USHBP1-203ENST00000431146 ADAM23O75077 832 aa16.21■□□□□ 0.18
USHBP1-203ENST00000431146 C1orf105O95561 183 aa16.21■□□□□ 0.18
USHBP1-203ENST00000431146 KRT6AP02538 564 aa16.21■□□□□ 0.18
USHBP1-203ENST00000431146 KRT6BP04259 564 aa16.21■□□□□ 0.18
USHBP1-203ENST00000431146 CD22P20273 847 aa16.21■□□□□ 0.18
USHBP1-203ENST00000431146 COL9A1P20849 921 aa16.21■□□□□ 0.18
USHBP1-203ENST00000431146 IGFBP4P22692 258 aa16.21■□□□□ 0.18
USHBP1-203ENST00000431146 VHLP40337 213 aa16.21■□□□□ 0.18
USHBP1-203ENST00000431146 KRT6CP48668 564 aa16.21■□□□□ 0.18
USHBP1-203ENST00000431146 INPP5AQ14642 412 aa16.21■□□□□ 0.18
USHBP1-203ENST00000431146 ZNF776Q68DI1 518 aaPredicted RBP16.21■□□□□ 0.18
USHBP1-203ENST00000431146 AAGABQ6PD74 315 aa16.21■□□□□ 0.18
USHBP1-203ENST00000431146 TTC23LQ6PF05 361 aa16.21■□□□□ 0.18
USHBP1-203ENST00000431146 HACD2Q6Y1H2 254 aa16.21■□□□□ 0.18
USHBP1-203ENST00000431146 IL17RCQ8NAC3 791 aa16.21■□□□□ 0.18
USHBP1-203ENST00000431146 CLHC1Q8NHS4 586 aa16.21■□□□□ 0.18
USHBP1-203ENST00000431146 CCDC138Q96M89 665 aa16.21■□□□□ 0.18
USHBP1-203ENST00000431146 LRTM1Q9HBL6 345 aa16.21■□□□□ 0.18
USHBP1-203ENST00000431146 EPS15L1Q9UBC2 864 aa16.21■□□□□ 0.18
USHBP1-203ENST00000431146 SLC23A2Q9UGH3 650 aa16.21■□□□□ 0.18
USHBP1-203ENST00000431146 CROCCQ5TZA2 2017 aa16.2■□□□□ 0.18
USHBP1-203ENST00000431146 ANHXE9PGG2 379 aa16.2■□□□□ 0.18
USHBP1-203ENST00000431146 H3BNX3 289 aa16.2■□□□□ 0.18
USHBP1-203ENST00000431146 ANKRD28O15084 1053 aa16.2■□□□□ 0.18
USHBP1-203ENST00000431146 VEGFDO43915 354 aa16.2■□□□□ 0.18
USHBP1-203ENST00000431146 NTSR1P30989 418 aa16.2■□□□□ 0.18
USHBP1-203ENST00000431146 GNPDA1P46926 289 aa16.2■□□□□ 0.18
USHBP1-203ENST00000431146 MRPL19P49406 292 aaKnown RBP16.2■□□□□ 0.18
USHBP1-203ENST00000431146 DGKQP52824 942 aa16.2■□□□□ 0.18
USHBP1-203ENST00000431146 PLIN5Q00G26 463 aa16.2■□□□□ 0.18
USHBP1-203ENST00000431146 GRIK2Q13002 908 aa16.2■□□□□ 0.18
USHBP1-203ENST00000431146 ADGRE1Q14246 886 aa16.2■□□□□ 0.18
USHBP1-203ENST00000431146 SLC2A7Q6PXP3 512 aa16.2■□□□□ 0.18
USHBP1-203ENST00000431146 ADAMTSL4Q6UY14 1074 aa16.2■□□□□ 0.18
USHBP1-203ENST00000431146 LIX1Q8N485 282 aa16.2■□□□□ 0.18
USHBP1-203ENST00000431146 L3MBTL4Q8NA19 623 aa16.2■□□□□ 0.18
USHBP1-203ENST00000431146 LRRC58Q96CX6 371 aa16.2■□□□□ 0.18
USHBP1-203ENST00000431146 GPATCH1Q9BRR8 931 aaKnown RBP16.2■□□□□ 0.18
USHBP1-203ENST00000431146 PSMD13Q9UNM6 376 aa16.2■□□□□ 0.18
USHBP1-203ENST00000431146 FAM234BA2RU67 622 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 NME4O00746 187 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 AP1G1O43747 822 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 KLF8O95600 359 aaPredicted RBP16.19■□□□□ 0.18
USHBP1-203ENST00000431146 IRF8Q02556 426 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 NFYCQ13952 458 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 IRF4Q15306 451 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 XKR6Q5GH73 641 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 SUSD1Q6UWL2 747 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 ZFAND4Q86XD8 727 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 CHCHD4Q8N4Q1 142 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 OR2L2Q8NH16 312 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 OR14C36Q8NHC7 312 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 DNAJB14Q8TBM8 379 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 CD300AQ9UGN4 299 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 SNX6Q9UNH7 406 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 NVLO15381 856 aaKnown RBP16.19■□□□□ 0.18
USHBP1-203ENST00000431146 EEDO75530 441 aaKnown RBP16.19■□□□□ 0.18
USHBP1-203ENST00000431146 BCAS2O75934 225 aaPredicted RBP16.19■□□□□ 0.18
USHBP1-203ENST00000431146 MAT2AP31153 395 aaKnown RBP16.19■□□□□ 0.18
USHBP1-203ENST00000431146 PRKG2Q13237 762 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 TRIM25Q14258 630 aaKnown RBP16.19■□□□□ 0.18
USHBP1-203ENST00000431146 STARD3Q14849 445 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 TLR1Q15399 786 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 TAF11Q15544 211 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 LRRC36Q1X8D7 754 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 MUM1Q2TAK8 710 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 GGTA1PQ4G0N0 100 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 CYP2R1Q6VVX0 501 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 SYTL1Q8IYJ3 562 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 KRTCAP2Q8N6L1 136 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 PHC3Q8NDX5 983 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms