RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 RUFY1Q96T51 708 aa16.96■□□□□ 0.31
NUP50-208ENST00000430547 DPH2Q9BQC3 489 aaPredicted RBP16.96■□□□□ 0.31
NUP50-208ENST00000430547 TRIM56Q9BRZ2 755 aaKnown RBP16.96■□□□□ 0.31
NUP50-208ENST00000430547 CHRNA10Q9GZZ6 450 aa16.96■□□□□ 0.31
NUP50-208ENST00000430547 FAM60AQ9NP50 221 aa16.96■□□□□ 0.31
NUP50-208ENST00000430547 PCMTD2Q9NV79 361 aa16.96■□□□□ 0.31
NUP50-208ENST00000430547 IL1RAPL1Q9NZN1 696 aa16.96■□□□□ 0.31
NUP50-208ENST00000430547 SNX7Q9UNH6 387 aa16.96■□□□□ 0.31
NUP50-208ENST00000430547 NEU2Q9Y3R4 380 aa16.96■□□□□ 0.31
NUP50-208ENST00000430547 AP1M2Q9Y6Q5 423 aa16.96■□□□□ 0.31
NUP50-208ENST00000430547 SEC16AO15027 2179 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 C9J4A7 227 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 MKRN2OSH3BPM6 223 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 C1orf105O95561 183 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 FURINP09958 794 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 RAB40ALP0C0E4 278 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 PKMP14618 531 aaKnown RBP16.95■□□□□ 0.3
NUP50-208ENST00000430547 MAGP20916 626 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 PEBP1P30086 187 aaKnown RBP16.95■□□□□ 0.3
NUP50-208ENST00000430547 RORAP35398 523 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 BDKRB1P46663 353 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 SF1Q15637 639 aaKnown RBP16.95■□□□□ 0.3
NUP50-208ENST00000430547 ZIC1Q15915 447 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 UGT8Q16880 541 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 LONRF1Q17RB8 773 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 PTCHD3Q3KNS1 767 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 ZNF517Q6ZMY9 492 aaPredicted RBP16.95■□□□□ 0.3
NUP50-208ENST00000430547 ATG14Q6ZNE5 492 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 TMEM135Q86UB9 458 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 LMNTD2Q8IXW0 634 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 ZBTB2Q8N680 514 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 ENDOVQ8N8Q3 282 aaKnown RBP16.95■□□□□ 0.3
NUP50-208ENST00000430547 NAT8LQ8N9F0 302 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 LINC01555Q8NAE3 123 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 FLVCR1-AS1Q8TAF5 88 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 CALML6Q8TD86 181 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 THAP4Q8WY91 577 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 DDX47Q9H0S4 455 aaKnown RBP16.95■□□□□ 0.3
NUP50-208ENST00000430547 C20orf96Q9NUD7 363 aaPredicted RBP16.95■□□□□ 0.3
NUP50-208ENST00000430547 TXLNGQ9NUQ3 528 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 RUVBL2Q9Y230 463 aaKnown RBP16.95■□□□□ 0.3
NUP50-208ENST00000430547 NFS1Q9Y697 457 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 FER1L5A0AVI2 2057 aa16.95■□□□□ 0.3
NUP50-208ENST00000430547 ZSCAN9O15535 394 aaPredicted RBP16.94■□□□□ 0.3
NUP50-208ENST00000430547 RFPL1O75677 317 aa16.94■□□□□ 0.3
NUP50-208ENST00000430547 USP1O94782 785 aa16.94■□□□□ 0.3
NUP50-208ENST00000430547 ATP5DP30049 168 aa16.94■□□□□ 0.3
NUP50-208ENST00000430547 GNG11P61952 73 aa16.94■□□□□ 0.3
NUP50-208ENST00000430547 GRB7Q14451 532 aa16.94■□□□□ 0.3
NUP50-208ENST00000430547 TTLL9Q3SXZ7 439 aa16.94■□□□□ 0.3
NUP50-208ENST00000430547 CENPUQ71F23 418 aa16.94■□□□□ 0.3
NUP50-208ENST00000430547 PCGF5Q86SE9 256 aa16.94■□□□□ 0.3
NUP50-208ENST00000430547 GABPB2Q8TAK5 448 aaPredicted RBP16.94■□□□□ 0.3
NUP50-208ENST00000430547 ABHD17AQ96GS6 310 aa16.94■□□□□ 0.3
NUP50-208ENST00000430547 C17orf62Q9BQA9 187 aa16.94■□□□□ 0.3
NUP50-208ENST00000430547 MENTQ9BUN1 341 aa16.94■□□□□ 0.3
NUP50-208ENST00000430547 NLNQ9BYT8 704 aa16.94■□□□□ 0.3
NUP50-208ENST00000430547 ZNF71Q9NQZ8 489 aaPredicted RBP16.94■□□□□ 0.3
NUP50-208ENST00000430547 SRPK3Q9UPE1 567 aa16.94■□□□□ 0.3
NUP50-208ENST00000430547 PLCL2Q9UPR0 1127 aa16.94■□□□□ 0.3
NUP50-208ENST00000430547 PADI2Q9Y2J8 665 aa16.94■□□□□ 0.3
NUP50-208ENST00000430547 CCDC88CQ9P219 2028 aa16.93■□□□□ 0.3
NUP50-208ENST00000430547 MAGEA3P43357 314 aa16.93■□□□□ 0.3
NUP50-208ENST00000430547 PMS2P54278 862 aa16.93■□□□□ 0.3
NUP50-208ENST00000430547 CTBP1Q13363 440 aa16.93■□□□□ 0.3
NUP50-208ENST00000430547 IL10RAQ13651 578 aa16.93■□□□□ 0.3
NUP50-208ENST00000430547 PTK6Q13882 451 aa16.93■□□□□ 0.3
NUP50-208ENST00000430547 LACTB2Q53H82 288 aaPredicted RBP16.93■□□□□ 0.3
NUP50-208ENST00000430547 RNASEH2BQ5TBB1 312 aaKnown RBP16.93■□□□□ 0.3
NUP50-208ENST00000430547 TLDC1Q6P9B6 456 aa16.93■□□□□ 0.3
NUP50-208ENST00000430547 PTRH1Q86Y79 214 aaKnown RBP16.93■□□□□ 0.3
NUP50-208ENST00000430547 FAM20CQ8IXL6 584 aa16.93■□□□□ 0.3
NUP50-208ENST00000430547 LMNTD1Q8N9Z9 388 aa16.93■□□□□ 0.3
NUP50-208ENST00000430547 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.93■□□□□ 0.3
NUP50-208ENST00000430547 CAPZA3Q96KX2 299 aa16.93■□□□□ 0.3
NUP50-208ENST00000430547 FAM167BQ9BTA0 163 aa16.93■□□□□ 0.3
NUP50-208ENST00000430547 NDC1Q9BTX1 674 aa16.93■□□□□ 0.3
NUP50-208ENST00000430547 SPRTNQ9H040 489 aaPredicted RBP16.93■□□□□ 0.3
NUP50-208ENST00000430547 FBXO6Q9NRD1 293 aaPredicted RBP16.93■□□□□ 0.3
NUP50-208ENST00000430547 SPATA7Q9P0W8 599 aa16.93■□□□□ 0.3
NUP50-208ENST00000430547 GPN3Q9UHW5 284 aaPredicted RBP16.93■□□□□ 0.3
NUP50-208ENST00000430547 TCFL5Q9UL49 500 aa16.93■□□□□ 0.3
NUP50-208ENST00000430547 KLHL20Q9Y2M5 609 aa16.93■□□□□ 0.3
NUP50-208ENST00000430547 ZCWPW2A0A1B0GU75 182 aa16.92■□□□□ 0.3
NUP50-208ENST00000430547 USP27XA6NNY8 438 aa16.92■□□□□ 0.3
NUP50-208ENST00000430547 DNALI1O14645 258 aaPredicted RBP16.92■□□□□ 0.3
NUP50-208ENST00000430547 FKBP9O95302 570 aa16.92■□□□□ 0.3
NUP50-208ENST00000430547 ATXN8OSP0DMR3 200 aa16.92■□□□□ 0.3
NUP50-208ENST00000430547 PGAM1P18669 254 aa16.92■□□□□ 0.3
NUP50-208ENST00000430547 SLC1A2P43004 574 aa16.92■□□□□ 0.3
NUP50-208ENST00000430547 GABRA4P48169 554 aa16.92■□□□□ 0.3
NUP50-208ENST00000430547 NCF4Q15080 339 aa16.92■□□□□ 0.3
NUP50-208ENST00000430547 KLHL38Q2WGJ6 581 aa16.92■□□□□ 0.3
NUP50-208ENST00000430547 CCSMST1Q4G0I0 132 aa16.92■□□□□ 0.3
NUP50-208ENST00000430547 ZC3H12BQ5HYM0 836 aaKnown RBP16.92■□□□□ 0.3
NUP50-208ENST00000430547 LCN10Q6JVE6 187 aa16.92■□□□□ 0.3
NUP50-208ENST00000430547 RHBDD2Q6NTF9 364 aa16.92■□□□□ 0.3
NUP50-208ENST00000430547 FAM198BQ6UWH4 519 aa16.92■□□□□ 0.3
NUP50-208ENST00000430547 DENND6AQ8IWF6 608 aa16.92■□□□□ 0.3
NUP50-208ENST00000430547 DNAJC22Q8N4W6 341 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms