RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 ZNF552Q9H707 407 aaPredicted RBP16.75■□□□□ 0.27
DDR1-235ENST00000428153 WDR54Q9H977 334 aa16.75■□□□□ 0.27
DDR1-235ENST00000428153 ATP13A2Q9NQ11 1180 aa16.75■□□□□ 0.27
DDR1-235ENST00000428153 INTS7Q9NVH2 962 aaKnown RBP16.75■□□□□ 0.27
DDR1-235ENST00000428153 PIH1D1Q9NWS0 290 aaKnown RBP16.75■□□□□ 0.27
DDR1-235ENST00000428153 EURLQ9NYK6 297 aa16.75■□□□□ 0.27
DDR1-235ENST00000428153 DHCR7Q9UBM7 475 aaKnown RBP16.75■□□□□ 0.27
DDR1-235ENST00000428153 CDYLQ9Y232 598 aa16.75■□□□□ 0.27
DDR1-235ENST00000428153 MRFAP1Q9Y605 127 aa16.75■□□□□ 0.27
DDR1-235ENST00000428153 CCDC88CQ9P219 2028 aa16.74■□□□□ 0.27
DDR1-235ENST00000428153 WIPF3A6NGB9 483 aa16.74■□□□□ 0.27
DDR1-235ENST00000428153 OR51F1A6NGY5 319 aa16.74■□□□□ 0.27
DDR1-235ENST00000428153 AGPSO00116 658 aa16.74■□□□□ 0.27
DDR1-235ENST00000428153 SEMA7AO75326 666 aa16.74■□□□□ 0.27
DDR1-235ENST00000428153 GOT2P00505 430 aaKnown RBP16.74■□□□□ 0.27
DDR1-235ENST00000428153 CCR7P32248 378 aa16.74■□□□□ 0.27
DDR1-235ENST00000428153 AIMP2Q13155 320 aaKnown RBP16.74■□□□□ 0.27
DDR1-235ENST00000428153 OASLQ15646 514 aaKnown RBP16.74■□□□□ 0.27
DDR1-235ENST00000428153 CYP2A13Q16696 494 aa16.74■□□□□ 0.27
DDR1-235ENST00000428153 CCDC38Q502W7 563 aa16.74■□□□□ 0.27
DDR1-235ENST00000428153 PRR30Q53SZ7 412 aaPredicted RBP16.74■□□□□ 0.27
DDR1-235ENST00000428153 TCTE1Q5JU00 501 aa16.74■□□□□ 0.27
DDR1-235ENST00000428153 PPP1R32Q7Z5V6 425 aa16.74■□□□□ 0.27
DDR1-235ENST00000428153 SNRNP40Q96DI7 357 aaKnown RBP16.74■□□□□ 0.27
DDR1-235ENST00000428153 BARD1Q99728 777 aaKnown RBP16.74■□□□□ 0.27
DDR1-235ENST00000428153 RAB11FIP5Q9BXF6 653 aa16.74■□□□□ 0.27
DDR1-235ENST00000428153 IL1RAPL1Q9NZN1 696 aa16.74■□□□□ 0.27
DDR1-235ENST00000428153 CRYBG3Q68DQ2 2970 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 A0A1B0GX78 115 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 OR1I1O60431 355 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 CNOT3O75175 753 aaKnown RBP16.73■□□□□ 0.27
DDR1-235ENST00000428153 SLCO2B1O94956 709 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 APOA4P06727 396 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 UMODP07911 640 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 MAGP20916 626 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 CD9P21926 228 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 MMP11P24347 488 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 PRAMEP78395 509 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 PLEKHN1Q494U1 663 aaPredicted RBP16.73■□□□□ 0.27
DDR1-235ENST00000428153 FASTKD1Q53R41 847 aaKnown RBP16.73■□□□□ 0.27
DDR1-235ENST00000428153 ZC3H12BQ5HYM0 836 aaKnown RBP16.73■□□□□ 0.27
DDR1-235ENST00000428153 PPP1R21Q6ZMI0 780 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 Q6ZS92 163 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 MICALCLQ6ZW33 695 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 ZNF534Q76KX8 674 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 OVCH1Q7RTY7 1134 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 ZADH2Q8N4Q0 377 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 RNF10Q8N5U6 811 aaKnown RBP16.73■□□□□ 0.27
DDR1-235ENST00000428153 LINC01555Q8NAE3 123 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 OR2L8Q8NGY9 312 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 VPS50Q96JG6 964 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 ZNF285Q96NJ3 590 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 BAG1Q99933 345 aaPredicted RBP16.73■□□□□ 0.27
DDR1-235ENST00000428153 ETNK1Q9HBU6 452 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 MRM3Q9HC36 420 aaKnown RBP16.73■□□□□ 0.27
DDR1-235ENST00000428153 CASS4Q9NQ75 786 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 SLC22A11Q9NSA0 550 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 IRAK4Q9NWZ3 460 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 IMPACTQ9P2X3 320 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 NXT1Q9UKK6 140 aaKnown RBP16.73■□□□□ 0.27
DDR1-235ENST00000428153 PACSIN2Q9UNF0 486 aaPredicted RBP16.73■□□□□ 0.27
DDR1-235ENST00000428153 TCAF1Q9Y4C2 921 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 KLK4Q9Y5K2 254 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 CELSR2Q9HCU4 2923 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 CNTRLQ7Z7A1 2325 aa16.73■□□□□ 0.27
DDR1-235ENST00000428153 NUP210LQ5VU65 1888 aa16.72■□□□□ 0.27
DDR1-235ENST00000428153 TCRBV7S2A1N4TA0A589 114 aa16.72■□□□□ 0.27
DDR1-235ENST00000428153 TARM1B6A8C7 271 aa16.72■□□□□ 0.27
DDR1-235ENST00000428153 E7EVH7 732 aa16.72■□□□□ 0.27
DDR1-235ENST00000428153 PRMT5O14744 637 aaPredicted RBP16.72■□□□□ 0.27
DDR1-235ENST00000428153 LIASO43766 372 aa16.72■□□□□ 0.27
DDR1-235ENST00000428153 CBX6O95503 412 aa16.72■□□□□ 0.27
DDR1-235ENST00000428153 FTCDO95954 541 aa16.72■□□□□ 0.27
DDR1-235ENST00000428153 TTPAP49638 278 aa16.72■□□□□ 0.27
DDR1-235ENST00000428153 HSPA14Q0VDF9 509 aa16.72■□□□□ 0.27
DDR1-235ENST00000428153 MRPL49Q13405 166 aaKnown RBP16.72■□□□□ 0.27
DDR1-235ENST00000428153 EIF2S3LQ2VIR3 472 aaKnown RBP16.72■□□□□ 0.27
DDR1-235ENST00000428153 CRB2Q5IJ48 1285 aa16.72■□□□□ 0.27
DDR1-235ENST00000428153 MCATQ8IVS2 390 aaKnown RBP16.72■□□□□ 0.27
DDR1-235ENST00000428153 MPP5Q8N3R9 675 aa16.72■□□□□ 0.27
DDR1-235ENST00000428153 OR6P1Q8NGX9 317 aa16.72■□□□□ 0.27
DDR1-235ENST00000428153 ZUFSPQ96AP4 578 aa16.72■□□□□ 0.27
DDR1-235ENST00000428153 PANX3Q96QZ0 392 aa16.72■□□□□ 0.27
DDR1-235ENST00000428153 LUZP4Q9P127 313 aa16.72■□□□□ 0.27
DDR1-235ENST00000428153 SLC2A6Q9UGQ3 507 aa16.72■□□□□ 0.27
DDR1-235ENST00000428153 ANAPC5Q9UJX4 755 aa16.72■□□□□ 0.27
DDR1-235ENST00000428153 PLAGL1Q9UM63 463 aa16.72■□□□□ 0.27
DDR1-235ENST00000428153 FITM1A5D6W6 292 aa16.71■□□□□ 0.27
DDR1-235ENST00000428153 AP3B1O00203 1094 aa16.71■□□□□ 0.27
DDR1-235ENST00000428153 RASGRF2O14827 1237 aa16.71■□□□□ 0.27
DDR1-235ENST00000428153 DSCR3O14972 297 aa16.71■□□□□ 0.27
DDR1-235ENST00000428153 KPNA5O15131 536 aa16.71■□□□□ 0.27
DDR1-235ENST00000428153 SRPX2O60687 465 aaPredicted RBP16.71■□□□□ 0.27
DDR1-235ENST00000428153 CTSBP07858 339 aa16.71■□□□□ 0.27
DDR1-235ENST00000428153 AOAHP28039 575 aa16.71■□□□□ 0.27
DDR1-235ENST00000428153 RAPSNQ13702 412 aa16.71■□□□□ 0.27
DDR1-235ENST00000428153 GRB7Q14451 532 aa16.71■□□□□ 0.27
DDR1-235ENST00000428153 GRM7Q14831 915 aa16.71■□□□□ 0.27
DDR1-235ENST00000428153 TMED2Q15363 201 aa16.71■□□□□ 0.27
DDR1-235ENST00000428153 SEL1L2Q5TEA6 688 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms