RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 FUCA1P04066 466 aa17.46■□□□□ 0.39
AC055811.2-201ENST00000427497 HOXC4P09017 264 aaPredicted RBP17.46■□□□□ 0.39
AC055811.2-201ENST00000427497 PRDX6P30041 224 aa17.46■□□□□ 0.39
AC055811.2-201ENST00000427497 CCNG1P51959 295 aa17.46■□□□□ 0.39
AC055811.2-201ENST00000427497 NAA25Q14CX7 972 aa17.46■□□□□ 0.39
AC055811.2-201ENST00000427497 PLA2G4EQ3MJ16 856 aa17.46■□□□□ 0.39
AC055811.2-201ENST00000427497 XKR7Q5GH72 579 aa17.46■□□□□ 0.39
AC055811.2-201ENST00000427497 ANO7Q6IWH7 933 aa17.46■□□□□ 0.39
AC055811.2-201ENST00000427497 KLHDC8AQ8IYD2 350 aa17.46■□□□□ 0.39
AC055811.2-201ENST00000427497 CDYL2Q8N8U2 506 aa17.46■□□□□ 0.39
AC055811.2-201ENST00000427497 CATSPER2Q96P56 530 aa17.46■□□□□ 0.39
AC055811.2-201ENST00000427497 CCT7Q99832 543 aa17.46■□□□□ 0.39
AC055811.2-201ENST00000427497 TPSD1Q9BZJ3 242 aa17.46■□□□□ 0.39
AC055811.2-201ENST00000427497 DUSP15Q9H1R2 295 aaPredicted RBP17.46■□□□□ 0.39
AC055811.2-201ENST00000427497 RMI1Q9H9A7 625 aa17.46■□□□□ 0.39
AC055811.2-201ENST00000427497 PTGDR2Q9Y5Y4 395 aa17.46■□□□□ 0.39
AC055811.2-201ENST00000427497 THADAQ6YHU6 1953 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 LRRC72A6NJI9 287 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 KATNA1O75449 491 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 CHEK2O96017 543 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 CEACAM5P06731 702 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 BDKRB1P46663 353 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 DMPKQ09013 629 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 CCSMST1Q4G0I0 132 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 METRNLQ641Q3 311 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 MILR1Q7Z6M3 343 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 DDIASQ8IXT1 998 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 KIF2BQ8N4N8 673 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 DCBLD1Q8N8Z6 715 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 NETO1Q8TDF5 533 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 ATL1Q8WXF7 558 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 ATP6V1E2Q96A05 226 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 AKTIPQ9H8T0 292 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 BTRCQ9Y297 605 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 COPG1Q9Y678 874 aaKnown RBP17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 ATP6AP2A0A1C7CYW4 349 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 LATO43561 262 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 VPS4BO75351 444 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 ATP6AP2O75787 350 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 CAPN1P07384 714 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 LINC00032P0C843 101 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 EBLN1P0CF75 366 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 PRR35P0CG20 571 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 NQO1P15559 274 aaKnown RBP17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 KCNJ2P63252 427 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 CCDC6Q16204 474 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 USP39Q53GS9 565 aaKnown RBP17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 UNC5DQ6UXZ4 953 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 RNF165Q6ZSG1 346 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 PDZD3Q86UT5 571 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 METTL6Q8TCB7 284 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 SCARF2Q96GP6 870 aaPredicted RBP17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 PKP4Q99569 1192 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 RTKNQ9BST9 563 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 ZDHHC5Q9C0B5 715 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 PFDN4Q9NQP4 134 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 TM7SF3Q9NS93 570 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 MRGBPQ9NV56 204 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 STOX2Q9P2F5 926 aaPredicted RBP17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 TRPS1Q9UHF7 1281 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 POLG2Q9UHN1 485 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 ZNHIT2Q9UHR6 403 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 PCDHGA5Q9Y5G8 931 aa17.45■□□□□ 0.38
AC055811.2-201ENST00000427497 LAMA1P25391 3075 aa17.44■□□□□ 0.38
AC055811.2-201ENST00000427497 MED19A0JLT2 244 aaPredicted RBP17.44■□□□□ 0.38
AC055811.2-201ENST00000427497 UBDO15205 165 aa17.44■□□□□ 0.38
AC055811.2-201ENST00000427497 GDF9O60383 454 aa17.44■□□□□ 0.38
AC055811.2-201ENST00000427497 WDR47O94967 919 aa17.44■□□□□ 0.38
AC055811.2-201ENST00000427497 ZNF806P0C7X5 589 aa17.44■□□□□ 0.38
AC055811.2-201ENST00000427497 HGFP14210 728 aa17.44■□□□□ 0.38
AC055811.2-201ENST00000427497 KIAA1024LP59773 190 aa17.44■□□□□ 0.38
AC055811.2-201ENST00000427497 PFN3P60673 137 aa17.44■□□□□ 0.38
AC055811.2-201ENST00000427497 PLA2G2CQ5R387 149 aa17.44■□□□□ 0.38
AC055811.2-201ENST00000427497 AGTRAPQ6RW13 159 aa17.44■□□□□ 0.38
AC055811.2-201ENST00000427497 RINLQ6ZS11 566 aa17.44■□□□□ 0.38
AC055811.2-201ENST00000427497 HOMEZQ8IX15 550 aa17.44■□□□□ 0.38
AC055811.2-201ENST00000427497 CMTM5Q96DZ9 223 aa17.44■□□□□ 0.38
AC055811.2-201ENST00000427497 MARK4Q96L34 752 aa17.44■□□□□ 0.38
AC055811.2-201ENST00000427497 TIMM29Q9BSF4 260 aa17.44■□□□□ 0.38
AC055811.2-201ENST00000427497 BTBD10Q9BSF8 475 aa17.44■□□□□ 0.38
AC055811.2-201ENST00000427497 DNAJC11Q9NVH1 559 aa17.44■□□□□ 0.38
AC055811.2-201ENST00000427497 TAS2R1Q9NYW7 299 aa17.44■□□□□ 0.38
AC055811.2-201ENST00000427497 G3BP2Q9UN86 482 aaKnown RBP17.44■□□□□ 0.38
AC055811.2-201ENST00000427497 INVSQ9Y283 1065 aa17.44■□□□□ 0.38
AC055811.2-201ENST00000427497 PLXND1Q9Y4D7 1925 aa17.43■□□□□ 0.38
AC055811.2-201ENST00000427497 SPTBN2O15020 2390 aa17.43■□□□□ 0.38
AC055811.2-201ENST00000427497 POM121BA6NF01 834 aa17.43■□□□□ 0.38
AC055811.2-201ENST00000427497 PRR19A6NJB7 356 aa17.43■□□□□ 0.38
AC055811.2-201ENST00000427497 CACNB4O00305 520 aaPredicted RBP17.43■□□□□ 0.38
AC055811.2-201ENST00000427497 SEMA4FO95754 770 aa17.43■□□□□ 0.38
AC055811.2-201ENST00000427497 SLC16A8O95907 504 aa17.43■□□□□ 0.38
AC055811.2-201ENST00000427497 PIK3R1P27986 724 aa17.43■□□□□ 0.38
AC055811.2-201ENST00000427497 IMPA1P29218 277 aa17.43■□□□□ 0.38
AC055811.2-201ENST00000427497 ATP4BP51164 291 aa17.43■□□□□ 0.38
AC055811.2-201ENST00000427497 SF3A2Q15428 464 aaKnown RBP17.43■□□□□ 0.38
AC055811.2-201ENST00000427497 TCHHL1Q5QJ38 904 aaPredicted RBP17.43■□□□□ 0.38
AC055811.2-201ENST00000427497 OGFOD2Q6N063 350 aa17.43■□□□□ 0.38
AC055811.2-201ENST00000427497 OR56A3Q8NH54 315 aa17.43■□□□□ 0.38
AC055811.2-201ENST00000427497 PYCR2Q96C36 320 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms