RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 NCBP2P52298 156 aaKnown RBP eCLIP13.56□□□□□ -0.24
RPL28-202ENST00000426763 ITGA1P56199 1179 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 CAND1Q86VP6 1230 aaKnown RBP13.56□□□□□ -0.24
RPL28-202ENST00000426763 SLC5A11Q8WWX8 675 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 S100A13Q99584 98 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 HCN3Q9P1Z3 774 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 SUSD2Q9UGT4 822 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 A0A0G2JN53 185 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 A0A1W2PRB8 838 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 SLC18A1P54219 525 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 PON2Q15165 354 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 CST6Q15828 149 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 NCEH1Q6PIU2 408 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 RTL4Q6ZR62 310 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 TAS1R1Q7RTX1 841 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 SCML4Q8N228 414 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 CADM2Q8N3J6 435 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 DENND1AQ8TEH3 1009 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 TAF1P21675 1872 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 PREPP48147 710 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 PTCHD3Q3KNS1 767 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 GOLGA7Q7Z5G4 137 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 FAM98AQ8NCA5 519 aaKnown RBP13.56□□□□□ -0.24
RPL28-202ENST00000426763 MTERF3Q96E29 417 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 GPR174Q9BXC1 333 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 GALPQ9UBC7 116 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 SH3GLB1Q9Y371 365 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 TNRC6CQ9HCJ0 1690 aaKnown RBP13.56□□□□□ -0.24
RPL28-202ENST00000426763 N4BP2Q86UW6 1770 aaPredicted RBP13.56□□□□□ -0.24
RPL28-202ENST00000426763 hCG_2014768A0A024R1R8 64 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 VEGFDO43915 354 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 SHMT2P34897 504 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 MSX2P35548 267 aaPredicted RBP13.56□□□□□ -0.24
RPL28-202ENST00000426763 RPP38P78345 283 aaKnown RBP13.56□□□□□ -0.24
RPL28-202ENST00000426763 HPS6Q86YV9 775 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 SMYD1Q8NB12 490 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 AGAP11Q8TF27 550 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 TRAPPC9Q96Q05 1148 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 HSFX1Q9UBD0 423 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 MYH4Q9Y623 1939 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 CD247P20963 164 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 KRR1Q13601 381 aaKnown RBP13.55□□□□□ -0.24
RPL28-202ENST00000426763 LRRC26Q2I0M4 334 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 HKDC1Q2TB90 917 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 FAM92BQ6ZTR7 304 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 RANBP3LQ86VV4 465 aaPredicted RBP13.55□□□□□ -0.24
RPL28-202ENST00000426763 MCEMP1Q8IX19 187 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 PEX5LQ8IYB4 626 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 ZMIZ2Q8NF64 920 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 LPGAT1Q92604 370 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 CLSTN3Q9BQT9 956 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 SERHL2Q9H4I8 314 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 SERHLQ9NQF3 203 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 C8orf4Q9NR00 106 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 GSTK1Q9Y2Q3 226 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 DHRS7Q9Y394 339 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 CSTF2P33240 577 aaKnown RBP eCLIP13.55□□□□□ -0.24
RPL28-202ENST00000426763 HMGCS1Q01581 520 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 ANGPT1Q15389 498 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 ARMCX4Q5H9R4 360 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 NEK10Q6ZWH5 1172 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 TRPV3Q8NET8 790 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 OSBPL11Q9BXB4 747 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 FAM86C2PA6NEL3 165 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 LILRB3O75022 631 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 ACRV1P26436 265 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 PTDSS1P48651 473 aaKnown RBP13.55□□□□□ -0.24
RPL28-202ENST00000426763 DLG1Q12959 904 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 PRRT3Q5FWE3 981 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 POMZP3Q6PJE2 187 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.55□□□□□ -0.24
RPL28-202ENST00000426763 NCSTNQ92542 709 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 HCFC1R1Q9NWW0 138 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 CAPN8A6NHC0 703 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 STX16-NPEPL1H3BU86 382 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 K7ERQ8 282 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 STX16O14662 325 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 BCL10O95999 233 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 CEBPBP17676 345 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 BNIPLQ7Z465 357 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 HIPK1Q86Z02 1210 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 RELL1Q8IUW5 271 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 FAM3CQ92520 227 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 TRMT2BQ96GJ1 504 aaKnown RBP13.55□□□□□ -0.24
RPL28-202ENST00000426763 NECTIN3Q9NQS3 549 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 ZC4H2Q9NQZ6 224 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 ERVK-11Q9UQG0 969 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 DUXAA6NLW8 204 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 EBLN1P0CF75 366 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 SAGP10523 405 aaPredicted RBP13.55□□□□□ -0.24
RPL28-202ENST00000426763 GLDCP23378 1020 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 DUSP3P51452 185 aaPredicted RBP13.55□□□□□ -0.24
RPL28-202ENST00000426763 WDR4P57081 412 aaKnown RBP13.55□□□□□ -0.24
RPL28-202ENST00000426763 CSNK2BP67870 215 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 TOR1AIP1Q5JTV8 583 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 SLC30A8Q8IWU4 369 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 SLC38A4Q969I6 547 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 PPP1R14AQ96A00 147 aa13.55□□□□□ -0.24
RPL28-202ENST00000426763 RPRD1BQ9NQG5 326 aaKnown RBP13.55□□□□□ -0.24
RPL28-202ENST00000426763 ERGIC3Q9Y282 383 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms