RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 UBL7Q96S82 380 aaPredicted RBP13.16□□□□□ -0.3
SNX3-204ENST00000426155 RUFY1Q96T51 708 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 GPR21Q99679 349 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 AARSD1Q9BTE6 412 aaKnown RBP13.16□□□□□ -0.3
SNX3-204ENST00000426155 TUBB2BQ9BVA1 445 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 MFRPQ9BY79 579 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 ZC3H7BQ9UGR2 993 aaKnown RBP13.16□□□□□ -0.3
SNX3-204ENST00000426155 VPS9D1Q9Y2B5 631 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 PCM1Q15154 2024 aa13.16□□□□□ -0.3
SNX3-204ENST00000426155 PIEZO2Q9H5I5 2752 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 KALRNO60229 2985 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 A0A0J9YY10 115 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 ARHGEF33A8MVX0 844 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 SCRG1O75711 98 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 MATN4O95460 622 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 RPN2P04844 631 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 MAGP20916 626 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 CD9P21926 228 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 MAP4P27816 1152 aaKnown RBP13.15□□□□□ -0.3
SNX3-204ENST00000426155 ARL4CP56559 192 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 PDIA2Q13087 525 aaKnown RBP13.15□□□□□ -0.3
SNX3-204ENST00000426155 STEAP4Q687X5 459 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 FAM199XQ6PEV8 388 aaPredicted RBP13.15□□□□□ -0.3
SNX3-204ENST00000426155 CAPN12Q6ZSI9 719 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 TMEM126BQ8IUX1 230 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 LMNTD2Q8IXW0 634 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 CPNE9Q8IYJ1 553 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 ESX1Q8N693 406 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 FBXO36Q8NEA4 188 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 OR2L8Q8NGY9 312 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 CD200R1Q8TD46 325 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 CALML6Q8TD86 181 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 KCNJ9Q92806 393 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 SLC12A9Q9BXP2 914 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 CCDC68Q9H2F9 335 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 GPN2Q9H9Y4 310 aaPredicted RBP13.15□□□□□ -0.3
SNX3-204ENST00000426155 PPANQ9NQ55 473 aaKnown RBP13.15□□□□□ -0.3
SNX3-204ENST00000426155 GRHL1Q9NZI5 618 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 CROTQ9UKG9 612 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 SLC39A10Q9ULF5 831 aa13.15□□□□□ -0.3
SNX3-204ENST00000426155 CCDC88CQ9P219 2028 aa13.14□□□□□ -0.31
SNX3-204ENST00000426155 NRP2O60462 931 aa13.14□□□□□ -0.31
SNX3-204ENST00000426155 TTC4O95801 387 aa13.14□□□□□ -0.31
SNX3-204ENST00000426155 PRKAR1AP10644 381 aa13.14□□□□□ -0.31
SNX3-204ENST00000426155 ATP5DP30049 168 aa13.14□□□□□ -0.31
SNX3-204ENST00000426155 DLSTP36957 453 aa13.14□□□□□ -0.31
SNX3-204ENST00000426155 GABRA4P48169 554 aa13.14□□□□□ -0.31
SNX3-204ENST00000426155 CDKN2DP55273 166 aa13.14□□□□□ -0.31
SNX3-204ENST00000426155 YBX1P67809 324 aaKnown RBP13.14□□□□□ -0.31
SNX3-204ENST00000426155 TIAL1Q01085 375 aaKnown RBP eCLIP13.14□□□□□ -0.312e-6■■■■□ 22.1
SNX3-204ENST00000426155 ABHD18Q0P651 414 aa13.14□□□□□ -0.31
SNX3-204ENST00000426155 GPS2Q13227 327 aa13.14□□□□□ -0.31
SNX3-204ENST00000426155 LY6DQ14210 128 aa13.14□□□□□ -0.31
SNX3-204ENST00000426155 MAP7Q14244 749 aa13.14□□□□□ -0.31
SNX3-204ENST00000426155 FASTKQ14296 549 aaKnown RBP13.14□□□□□ -0.31
SNX3-204ENST00000426155 KIR2DS3Q14952 304 aa13.14□□□□□ -0.31
SNX3-204ENST00000426155 TRADDQ15628 312 aa13.14□□□□□ -0.31
SNX3-204ENST00000426155 CYB5D1Q6P9G0 228 aa13.14□□□□□ -0.31
SNX3-204ENST00000426155 PIWIL4Q7Z3Z4 852 aaKnown RBP13.14□□□□□ -0.31
SNX3-204ENST00000426155 MTERF4Q7Z6M4 381 aaKnown RBP13.14□□□□□ -0.31
SNX3-204ENST00000426155 CNTN4Q8IWV2 1026 aa13.14□□□□□ -0.31
SNX3-204ENST00000426155 EXTL1Q92935 676 aa13.14□□□□□ -0.31
SNX3-204ENST00000426155 KIAA1143Q96AT1 154 aaPredicted RBP13.14□□□□□ -0.31
SNX3-204ENST00000426155 RAD51AP1Q96B01 352 aa13.14□□□□□ -0.31
SNX3-204ENST00000426155 ERP44Q9BS26 406 aa13.14□□□□□ -0.31
SNX3-204ENST00000426155 NAT9Q9BTE0 207 aa13.14□□□□□ -0.31
SNX3-204ENST00000426155 LATS2Q9NRM7 1088 aa13.14□□□□□ -0.31
SNX3-204ENST00000426155 HEATR5BQ9P2D3 2071 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 FAM187AA6NFU0 413 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 E7ESA3 106 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 ERVH48-1M5A8F1 160 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 SMAPO00193 183 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 TERTO14746 1132 aaKnown RBP13.13□□□□□ -0.31
SNX3-204ENST00000426155 ATXN7O15265 892 aaPredicted RBP13.13□□□□□ -0.31
SNX3-204ENST00000426155 NKX2-8O15522 239 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 KDM1AO60341 852 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 CPNE3O75131 537 aaKnown RBP13.13□□□□□ -0.31
SNX3-204ENST00000426155 PIAS1O75925 651 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 AHSGP02765 367 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 MCM3P25205 808 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 RHDQ02161 417 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 SLC5A12Q1EHB4 618 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 TEDDM1Q5T9Z0 273 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 LCN10Q6JVE6 187 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 TTC23LQ6PF05 361 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 ZBED8Q8IZ13 594 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 CT55Q8WUE5 264 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 STARD8Q92502 1023 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 ZNF592Q92610 1267 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 FOPNLQ96NB1 174 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 SEMA4CQ9C0C4 833 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 FANCEQ9HB96 536 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 LHX9Q9NQ69 397 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 DHRS7Q9Y394 339 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 PSAT1Q9Y617 370 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 BSNQ9UPA5 3926 aa13.13□□□□□ -0.31
SNX3-204ENST00000426155 CFAP46Q8IYW2 2715 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 A0A1W2PPV9 198 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 PRICKLE3O43900 615 aaPredicted RBP13.12□□□□□ -0.31
SNX3-204ENST00000426155 VPS26AO75436 327 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms