RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 OR52A5Q9H2C5 316 aa25.76■■□□□ 1.71
LDB1-202ENST00000425280 CROTQ9UKG9 612 aa25.76■■□□□ 1.71
LDB1-202ENST00000425280 ANGPT2O15123 496 aa25.76■■□□□ 1.71
LDB1-202ENST00000425280 RNGTTO60942 597 aaKnown RBP25.76■■□□□ 1.71
LDB1-202ENST00000425280 G6PDP11413 515 aa25.76■■□□□ 1.71
LDB1-202ENST00000425280 IL12AP29459 219 aa25.76■■□□□ 1.71
LDB1-202ENST00000425280 HALP42357 657 aa25.76■■□□□ 1.71
LDB1-202ENST00000425280 RPL38P63173 70 aaKnown RBP25.76■■□□□ 1.71
LDB1-202ENST00000425280 MRPS21P82921 87 aaKnown RBP25.76■■□□□ 1.71
LDB1-202ENST00000425280 IMPG1Q17R60 797 aa25.76■■□□□ 1.71
LDB1-202ENST00000425280 SMU1Q2TAY7 513 aa25.76■■□□□ 1.71
LDB1-202ENST00000425280 CYP20A1Q6UW02 462 aa25.76■■□□□ 1.71
LDB1-202ENST00000425280 RNF148Q8N7C7 305 aa25.76■■□□□ 1.71
LDB1-202ENST00000425280 PROKR1Q8TCW9 393 aa25.76■■□□□ 1.71
LDB1-202ENST00000425280 OR4K3Q96R72 315 aa25.76■■□□□ 1.71
LDB1-202ENST00000425280 TMEM45AQ9NWC5 275 aa25.76■■□□□ 1.71
LDB1-202ENST00000425280 TMEM265A0A087WTH1 108 aa25.75■■□□□ 1.71
LDB1-202ENST00000425280 XRCC1P18887 633 aaPredicted RBP25.75■■□□□ 1.71
LDB1-202ENST00000425280 GNPDA1P46926 289 aa25.75■■□□□ 1.71
LDB1-202ENST00000425280 KCNK10P57789 538 aa25.75■■□□□ 1.71
LDB1-202ENST00000425280 SELENOMQ8WWX9 145 aa25.75■■□□□ 1.71
LDB1-202ENST00000425280 SLC17A9Q9BYT1 436 aa25.75■■□□□ 1.71
LDB1-202ENST00000425280 ACPTQ9BZG2 426 aa25.75■■□□□ 1.71
LDB1-202ENST00000425280 ZDHHC5Q9C0B5 715 aa25.75■■□□□ 1.71
LDB1-202ENST00000425280 ELOVL6Q9H5J4 265 aa25.75■■□□□ 1.71
LDB1-202ENST00000425280 LRTM1Q9HBL6 345 aa25.75■■□□□ 1.71
LDB1-202ENST00000425280 TM7SF3Q9NS93 570 aa25.75■■□□□ 1.71
LDB1-202ENST00000425280 ADA2Q9NZK5 511 aa25.75■■□□□ 1.71
LDB1-202ENST00000425280 STX18Q9P2W9 335 aaKnown RBP25.75■■□□□ 1.71
LDB1-202ENST00000425280 JUPP14923 745 aa25.75■■□□□ 1.71
LDB1-202ENST00000425280 NEK2P51955 445 aa25.75■■□□□ 1.71
LDB1-202ENST00000425280 POLR2JP52435 117 aaKnown RBP25.75■■□□□ 1.71
LDB1-202ENST00000425280 COQ5Q5HYK3 327 aa25.75■■□□□ 1.71
LDB1-202ENST00000425280 OXR1Q8N573 874 aa25.75■■□□□ 1.71
LDB1-202ENST00000425280 SPDYE1Q8NFV5 336 aaPredicted RBP25.75■■□□□ 1.71
LDB1-202ENST00000425280 ZNF480Q8WV37 535 aa25.75■■□□□ 1.71
LDB1-202ENST00000425280 MAGEB10Q96LZ2 347 aaPredicted RBP25.75■■□□□ 1.71
LDB1-202ENST00000425280 ACTL8Q9H568 366 aa25.75■■□□□ 1.71
LDB1-202ENST00000425280 NUMA1Q14980 2115 aa25.74■■□□□ 1.71
LDB1-202ENST00000425280 EYSQ5T1H1 3165 aa25.74■■□□□ 1.71
LDB1-202ENST00000425280 A0A1W2PP18 115 aa25.74■■□□□ 1.71
LDB1-202ENST00000425280 FAM234BA2RU67 622 aa25.74■■□□□ 1.71
LDB1-202ENST00000425280 ANKRD28O15084 1053 aa25.74■■□□□ 1.71
LDB1-202ENST00000425280 ME2P23368 584 aa25.74■■□□□ 1.71
LDB1-202ENST00000425280 IRF8Q02556 426 aa25.74■■□□□ 1.71
LDB1-202ENST00000425280 RPA4Q13156 261 aa25.74■■□□□ 1.71
LDB1-202ENST00000425280 LIPJQ5W064 366 aa25.74■■□□□ 1.71
LDB1-202ENST00000425280 VPS33AQ96AX1 596 aa25.74■■□□□ 1.71
LDB1-202ENST00000425280 SIPA1Q96FS4 1042 aa25.74■■□□□ 1.71
LDB1-202ENST00000425280 SCML1Q9UN30 329 aa25.74■■□□□ 1.71
LDB1-202ENST00000425280 ASPDHA6ND91 283 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 E7EQ34 232 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 MBTPS2O43462 519 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 UGDHO60701 494 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 CD22P20273 847 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 HORMAD1Q86X24 394 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 ZFAND4Q86XD8 727 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 OR9A1PQ8NGU1 263 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 JADE3Q92613 823 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 LRCH3Q96II8 777 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 SLC39A3Q9BRY0 314 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 SPAG4Q9NPE6 437 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 PHPT1Q9NRX4 125 aaPredicted RBP25.73■■□□□ 1.71
LDB1-202ENST00000425280 DNMT3AQ9Y6K1 912 aaPredicted RBP25.73■■□□□ 1.71
LDB1-202ENST00000425280 TBC1D3DA0A087WVF3 549 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 TBC1D3IA0A087WXS9 549 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 TBC1D3EA0A087X179 549 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 TBC1D3KA0A087X1G2 549 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 TBC1D3FA6NER0 549 aaPredicted RBP25.73■■□□□ 1.71
LDB1-202ENST00000425280 TBC1D3LB9A6J9 549 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 SEC22BO75396 215 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 ANP32DO95626 131 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 ASGR2P07307 311 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 TBC1D3HP0C7X1 549 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 MSX2P35548 267 aaPredicted RBP25.73■■□□□ 1.71
LDB1-202ENST00000425280 MAD2L1Q13257 205 aaPredicted RBP25.73■■□□□ 1.71
LDB1-202ENST00000425280 SMAD4Q13485 552 aaKnown RBP25.73■■□□□ 1.71
LDB1-202ENST00000425280 XKR6Q5GH73 641 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 HABP4Q5JVS0 413 aaKnown RBP25.73■■□□□ 1.71
LDB1-202ENST00000425280 TBC1D3GQ6DHY5 549 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 TBC1D3CQ6IPX1 549 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 UNC5DQ6UXZ4 953 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 PDZD3Q86UT5 571 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 TBC1D3Q8IZP1 549 aaPredicted RBP25.73■■□□□ 1.71
LDB1-202ENST00000425280 GPATCH1Q9BRR8 931 aaKnown RBP25.73■■□□□ 1.71
LDB1-202ENST00000425280 C1orf109Q9NX04 203 aa25.73■■□□□ 1.71
LDB1-202ENST00000425280 EIF3LQ9Y262 564 aaKnown RBP25.73■■□□□ 1.71
LDB1-202ENST00000425280 TRIM38O00635 465 aa25.72■■□□□ 1.71
LDB1-202ENST00000425280 FKBP6O75344 327 aa25.72■■□□□ 1.71
LDB1-202ENST00000425280 MAP7D1Q3KQU3 841 aa25.72■■□□□ 1.71
LDB1-202ENST00000425280 FRG2Q64ET8 278 aa25.72■■□□□ 1.71
LDB1-202ENST00000425280 RPLP0P6Q8NHW5 317 aa25.72■■□□□ 1.71
LDB1-202ENST00000425280 FRG2BQ96QU4 278 aa25.72■■□□□ 1.71
LDB1-202ENST00000425280 IL1RL2Q9HB29 575 aa25.72■■□□□ 1.71
LDB1-202ENST00000425280 PREBQ9HCU5 417 aa25.72■■□□□ 1.71
LDB1-202ENST00000425280 TMEM181Q9P2C4 612 aa25.72■■□□□ 1.71
LDB1-202ENST00000425280 FZD4Q9ULV1 537 aa25.72■■□□□ 1.71
LDB1-202ENST00000425280 CCDC154A6NI56 674 aa25.72■■□□□ 1.71
LDB1-202ENST00000425280 SHISA7A6NL88 538 aa25.72■■□□□ 1.71
LDB1-202ENST00000425280 GPR89AB7ZAQ6 455 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms