RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 HLA-DQB2P05538 268 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 YES1P07947 543 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 IL7P13232 177 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 TKTL1P51854 596 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 VGLL4Q14135 290 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 MED22Q15528 200 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 FAM174BQ3ZCQ3 159 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 ZNF549Q6P9A3 640 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 TIGD4Q8IY51 512 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 FBXL6Q8N531 539 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 ISG20Q96AZ6 181 aaKnown RBP11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 GON7Q9BXV9 100 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 AS3MTQ9HBK9 375 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 ABCB8Q9NUT2 735 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 SIRT5Q9NXA8 310 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 RNF112Q9ULX5 631 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 KCNH4Q9UQ05 1017 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 RWDD3Q9Y3V2 267 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 FFAR3O14843 346 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 GPR42O15529 346 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 PTHP01270 115 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 ZNF45Q02386 682 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 NFE2L1Q14494 772 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 ZMYND11Q15326 602 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 SPATS1Q496A3 300 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 IL27RAQ6UWB1 636 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 GPRIN1Q7Z2K8 1008 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 P3H2Q8IVL5 708 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 CNTN4Q8IWV2 1026 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 ADHFE1Q8IWW8 467 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 WNT8BQ93098 351 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 MSANTD3Q96H12 275 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 ACTL8Q9H568 366 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 MAP3K20Q9NYL2 800 aaKnown RBP11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 MPP6Q9NZW5 540 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 KIF17Q9P2E2 1029 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 SLC23A1Q9UHI7 598 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 OGDHLQ9ULD0 1010 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 TIMM13Q9Y5L4 95 aaPredicted RBP11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 VCANP13611 3396 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 MYLKQ15746 1914 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 NUPL2O15504 423 aaKnown RBP11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 PRKACAP17612 351 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 IL12RB1P42701 662 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 RAD51Q06609 339 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 NR6A1Q15406 480 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 ARMCX4Q5H9R4 360 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 C9orf131Q5VYM1 1079 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 Q6ZSR9 355 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 RAB44Q7Z6P3 723 aaPredicted RBP11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 UBE2Q1Q7Z7E8 422 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 CILP2Q8IUL8 1156 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 FBXO39Q8N4B4 442 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 MTFMTQ96DP5 389 aaKnown RBP11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 RIPOR3Q96MK2 946 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 CYP2S1Q96SQ9 504 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 MED10Q9BTT4 135 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 CNPPD1Q9BV87 410 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 ULBP1Q9BZM6 244 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 ABCB9Q9NP78 766 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 SARS2Q9NP81 518 aaKnown RBP11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 RAD18Q9NS91 495 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 TREX1Q9NSU2 369 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 MALT1Q9UDY8 824 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 GTF2IRD1Q9UHL9 959 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 NUP50Q9UKX7 468 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 CLCA3PQ9Y6N3 262 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 UPK3BL1B0FP48 263 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 C19orf81C9J6K1 198 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 UPK3BL2E5RIL1 263 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 ATP6V1G2-DDX39BF2Z307 99 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 I3L521 148 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 OR1I1O60431 355 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 MOCS2O96007 188 aaPredicted RBP11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 HPRP00739 348 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 PAMP19021 973 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 EFNA1P20827 205 aaPredicted RBP11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 RYKP34925 604 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 SLC9A3P48764 834 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 RPP38P78345 283 aaKnown RBP11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 SEMA3AQ14563 771 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 MAD2L1BPQ15013 274 aaPredicted RBP11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 FAM122CQ6P4D5 195 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 PAQR3Q6TCH7 311 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 ZMIZ2Q8NF64 920 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 OR5K1Q8NHB7 308 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 SLC7A6Q92536 515 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 L3HYPDHQ96EM0 354 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 MRGPRX2Q96LB1 330 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 SMIM14Q96QK8 99 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 OR5M11Q96RB7 305 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 NPY6RQ99463 290 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 SLC30A2Q9BRI3 323 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 C1QTNF6Q9BXI9 259 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 MRPL9Q9BYD2 267 aaKnown RBP11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 RNF181Q9P0P0 153 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 EIF2B4Q9UI10 523 aaKnown RBP11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 HCN4Q9Y3Q4 1203 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 ELOVL7A1L3X0 281 aa11.03□□□□□ -0.64
SEC61A1-202ENST00000424880 NPEPPSL1A6NEC2 478 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms