RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 LRRTM1Q86UE6 522 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 SPAG16Q8N0X2 631 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 ARHGAP24Q8N264 748 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 RAB42Q8N4Z0 105 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 KBTBD8Q8NFY9 601 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 CCDC107Q8WV48 283 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 JAKMIP2Q96AA8 810 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 DHX58Q96C10 678 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 CALML4Q96GE6 196 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 S1PR5Q9H228 398 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 ADD3Q9UEY8 706 aaKnown RBP3.39□□□□□ -1.87
LINC00397-201ENST00000422074 ZHX1Q9UKY1 873 aaPredicted RBP3.39□□□□□ -1.87
LINC00397-201ENST00000422074 WDR37Q9Y2I8 494 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 CSAG2Q9Y5P2 127 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 A0A1W2PQ09 198 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 hCG_1807616A0A1W2PRN6 198 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 ANKRD61A6NGH8 418 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 C15orf61A6NNL5 157 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 SRSF10O75494 262 aaKnown RBP3.38□□□□□ -1.87
LINC00397-201ENST00000422074 TOMM70O94826 608 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 NXPH2O95156 264 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 ZWINTO95229 277 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 DUS4LO95620 317 aaKnown RBP3.38□□□□□ -1.87
LINC00397-201ENST00000422074 LDHCP07864 332 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 HSP90AA1P07900 732 aaKnown RBP3.38□□□□□ -1.87
LINC00397-201ENST00000422074 DANCRP0C864 163 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 BDNFP23560 247 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 GCH1P30793 250 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 TPD52P55327 224 aaPredicted RBP3.38□□□□□ -1.87
LINC00397-201ENST00000422074 MAT1AQ00266 395 aaKnown RBP3.38□□□□□ -1.87
LINC00397-201ENST00000422074 TNIP1Q15025 636 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 MEA1Q16626 185 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 C2CD6Q53TS8 623 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 XKR3Q5GH77 459 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 WLSQ5T9L3 541 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 BSPRYQ5W0U4 402 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 TEX38Q6PEX7 206 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 Q6ZRP5 223 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 SZRD1Q7Z422 152 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 KBTBD6Q86V97 674 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 HOGA1Q86XE5 327 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 ERC1Q8IUD2 1116 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 GUF1Q8N442 669 aaKnown RBP3.38□□□□□ -1.87
LINC00397-201ENST00000422074 NIPA2Q8N8Q9 360 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 POC5Q8NA72 575 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 EXD1Q8NHP7 514 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 SLCO2A1Q92959 643 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 C10orf90Q96M02 699 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 CDRT15Q96T59 188 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 RAD9AQ99638 391 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 FNDC11Q9BVV2 318 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 NUP85Q9BW27 656 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 OR2B2Q9GZK3 357 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 RPS10P5Q9NQ39 176 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 NSMCE4AQ9NXX6 385 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 CACNG4Q9UBN1 327 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 TBC1D29Q9UFV1 150 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 TMEM5Q9Y2B1 443 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 PCDH11YQ9BZA8 1340 aa3.38□□□□□ -1.87
LINC00397-201ENST00000422074 GPR75-ASB3A0A0A6YYF3 556 aa3.37□□□□□ -1.87
LINC00397-201ENST00000422074 A0A1W2PPR1 153 aa3.37□□□□□ -1.87
LINC00397-201ENST00000422074 MPTX1A8MV57 137 aa3.37□□□□□ -1.87
LINC00397-201ENST00000422074 PI15O43692 258 aa3.37□□□□□ -1.87
LINC00397-201ENST00000422074 GLRA3O75311 464 aa3.37□□□□□ -1.87
LINC00397-201ENST00000422074 CDK2AP2O75956 126 aa3.37□□□□□ -1.87
LINC00397-201ENST00000422074 CLDN1O95832 211 aa3.37□□□□□ -1.87
LINC00397-201ENST00000422074 HSPA8P11142 646 aaKnown RBP3.37□□□□□ -1.87
LINC00397-201ENST00000422074 SAT1P21673 171 aa3.37□□□□□ -1.87
LINC00397-201ENST00000422074 GRAPQ13588 217 aa3.37□□□□□ -1.87
LINC00397-201ENST00000422074 ZNF239Q16600 458 aaKnown RBP3.37□□□□□ -1.87
LINC00397-201ENST00000422074 PHLDA2Q53GA4 152 aa3.37□□□□□ -1.87
LINC00397-201ENST00000422074 TCTEX1D4Q5JR98 221 aa3.37□□□□□ -1.87
LINC00397-201ENST00000422074 SUSD1Q6UWL2 747 aa3.37□□□□□ -1.87
LINC00397-201ENST00000422074 FBXO39Q8N4B4 442 aa3.37□□□□□ -1.87
LINC00397-201ENST00000422074 AFAP1Q8N556 730 aa3.37□□□□□ -1.87
LINC00397-201ENST00000422074 NSUN4Q96CB9 384 aaKnown RBP3.37□□□□□ -1.87
LINC00397-201ENST00000422074 FOXN4Q96NZ1 517 aa3.37□□□□□ -1.87
LINC00397-201ENST00000422074 MS4A10Q96PG2 267 aa3.37□□□□□ -1.87
LINC00397-201ENST00000422074 USP28Q96RU2 1077 aa3.37□□□□□ -1.87
LINC00397-201ENST00000422074 PAFAH2Q99487 392 aa3.37□□□□□ -1.87
LINC00397-201ENST00000422074 OLFM1Q99784 485 aa3.37□□□□□ -1.87
LINC00397-201ENST00000422074 SHARPINQ9H0F6 387 aa3.37□□□□□ -1.87
LINC00397-201ENST00000422074 EPHA6Q9UF33 1036 aa3.37□□□□□ -1.87
LINC00397-201ENST00000422074 DAPK2Q9UIK4 370 aa3.37□□□□□ -1.87
LINC00397-201ENST00000422074 CROCCQ5TZA2 2017 aa3.36□□□□□ -1.87
LINC00397-201ENST00000422074 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.36□□□□□ -1.87
LINC00397-201ENST00000422074 SOCS3O14543 225 aa3.36□□□□□ -1.87
LINC00397-201ENST00000422074 CSH1P0DML2 217 aa3.36□□□□□ -1.87
LINC00397-201ENST00000422074 CSH2P0DML3 217 aa3.36□□□□□ -1.87
LINC00397-201ENST00000422074 CYP2A7P20853 494 aa3.36□□□□□ -1.87
LINC00397-201ENST00000422074 ACTN2P35609 894 aa3.36□□□□□ -1.87
LINC00397-201ENST00000422074 NRIP1P48552 1158 aa3.36□□□□□ -1.87
LINC00397-201ENST00000422074 PAX9P55771 341 aa3.36□□□□□ -1.87
LINC00397-201ENST00000422074 ELAVL2Q12926 359 aaKnown RBP3.36□□□□□ -1.87
LINC00397-201ENST00000422074 EPS8Q12929 822 aa3.36□□□□□ -1.87
LINC00397-201ENST00000422074 NFATC2Q13469 925 aa3.36□□□□□ -1.87
LINC00397-201ENST00000422074 BAATQ14032 418 aaPredicted RBP3.36□□□□□ -1.87
LINC00397-201ENST00000422074 NECTIN1Q15223 517 aa3.36□□□□□ -1.87
LINC00397-201ENST00000422074 SLC25A53Q5H9E4 307 aa3.36□□□□□ -1.87
LINC00397-201ENST00000422074 ELFN2Q5R3F8 820 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms