RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 MYH10P35580 1976 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 A0A1B0GUL6 1792 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 NUP98P52948 1817 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 KAT6BQ8WYB5 2073 aa2.61□□□□□ -1.99
VPS41-206ENST00000418457 AHDC1Q5TGY3 1603 aaPredicted RBP2.6□□□□□ -1.99
VPS41-206ENST00000418457 TNRC6CQ9HCJ0 1690 aaKnown RBP2.6□□□□□ -1.99
VPS41-206ENST00000418457 MYH7BA7E2Y1 1941 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 MYH4Q9Y623 1939 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 SHANK3Q9BYB0 1731 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 SAA2-SAA4A0A096LPE2 208 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 KANSL1LA0AUZ9 987 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 PLSCR5A0PG75 271 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 ZNF233A6NK53 670 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 CCDC169A6NNP5 214 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 C4orf47A7E2U8 309 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 ANKRD65E5RJM6 399 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 E7ENQ6 273 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 H3BQ06 376 aaPredicted RBP2.6□□□□□ -1.99
VPS41-206ENST00000418457 PGRMC1O00264 195 aaKnown RBP2.6□□□□□ -1.99
VPS41-206ENST00000418457 O00370 1275 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 HS3ST1O14792 307 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 ATP2A1O14983 1001 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 MID1O15344 667 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 KLRC4O43908 158 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 HS6ST1O60243 411 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 TOM1O60784 492 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 GFPT2O94808 682 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 OR2C1O95371 312 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 AFPP02771 609 aaKnown RBP2.6□□□□□ -1.99
VPS41-206ENST00000418457 CLTBP09497 229 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 FGF3P11487 239 aaPredicted RBP2.6□□□□□ -1.99
VPS41-206ENST00000418457 ATP5DP30049 168 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 CTNNA1P35221 906 aaKnown RBP2.6□□□□□ -1.99
VPS41-206ENST00000418457 HADHAP40939 763 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 FASLGP48023 281 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 CDH8P55286 799 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 TAS2R40P59535 323 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 SARNPP82979 210 aaKnown RBP2.6□□□□□ -1.99
VPS41-206ENST00000418457 GUCY2DQ02846 1103 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 TROAPQ12815 778 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 IFT88Q13099 833 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 MAD2L1Q13257 205 aaPredicted RBP2.6□□□□□ -1.99
VPS41-206ENST00000418457 PDE1CQ14123 709 aaPredicted RBP2.6□□□□□ -1.99
VPS41-206ENST00000418457 ASTE1Q2TB18 679 aaPredicted RBP2.6□□□□□ -1.99
VPS41-206ENST00000418457 PCGF3Q3KNV8 242 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 ODF2Q5BJF6 829 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 ZNF805Q5CZA5 627 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 CMPK2Q5EBM0 449 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 KCNT1Q5JUK3 1230 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 LRIF1Q5T3J3 769 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 SFMBT2Q5VUG0 894 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 C9orf57Q5W0N0 161 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 FAM205BPQ63HN1 556 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 JADE1Q6IE81 842 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 CENPPQ6IPU0 288 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 ZNF280DQ6N043 979 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 PRSS57Q6UWY2 283 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 CHST9Q7L1S5 443 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 C16orf82Q7Z2V1 217 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 SDCCAG8Q86SQ7 713 aaPredicted RBP2.6□□□□□ -1.99
VPS41-206ENST00000418457 ADGRF2Q8IZF7 708 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 BLIDQ8IZY5 108 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 SYCE1Q8N0S2 351 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 GUF1Q8N442 669 aaKnown RBP2.6□□□□□ -1.99
VPS41-206ENST00000418457 SRBD1Q8N5C6 995 aaKnown RBP2.6□□□□□ -1.99
VPS41-206ENST00000418457 TEX9Q8N6V9 391 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 CCDC197Q8NCU1 140 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 OR2AK2Q8NG84 335 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 OR8K5Q8NH50 307 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 MOAP1Q96BY2 351 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 ELMOD3Q96FG2 381 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 CHMP6Q96FZ7 201 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 BICD1Q96G01 975 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 PGM2Q96G03 612 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 CALML4Q96GE6 196 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 GRAMD2BQ96HH9 432 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 PGAM5Q96HS1 289 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 GDAP1L1Q96MZ0 367 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 RUNDC3BQ96NL0 473 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 INPP4AQ96PE3 977 aaPredicted RBP2.6□□□□□ -1.99
VPS41-206ENST00000418457 DUX5Q96PT3 197 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 MTERF1Q99551 399 aaKnown RBP2.6□□□□□ -1.99
VPS41-206ENST00000418457 CMKLR1Q99788 373 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 LZTS2Q9BRK4 669 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 C1QTNF4Q9BXJ3 329 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 RAB34Q9BZG1 259 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 SPRY4Q9C004 299 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 RAB17Q9H0T7 212 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 BLZF1Q9H2G9 400 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 PIGMQ9H3S5 423 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 SMARCAD1Q9H4L7 1026 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 GAREM1Q9H706 876 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 EBF2Q9HAK2 575 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 PPANQ9NQ55 473 aaKnown RBP2.6□□□□□ -1.99
VPS41-206ENST00000418457 PIH1D3Q9NQM4 214 aaKnown RBP2.6□□□□□ -1.99
VPS41-206ENST00000418457 AGPAT5Q9NUQ2 364 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 HAUS2Q9NVX0 235 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 VPS54Q9P1Q0 977 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 COPG2Q9UBF2 871 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 UBA2Q9UBT2 640 aaPredicted RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms