RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 SLC25A18Q9H1K4 315 aa14.78□□□□□ -0.04
NUP50-204ENST00000417702 CHST8Q9H2A9 424 aa14.78□□□□□ -0.04
NUP50-204ENST00000417702 ACTL8Q9H568 366 aa14.78□□□□□ -0.04
NUP50-204ENST00000417702 AKIRIN1Q9H9L7 192 aaPredicted RBP14.78□□□□□ -0.04
NUP50-204ENST00000417702 FAM60AQ9NP50 221 aa14.78□□□□□ -0.04
NUP50-204ENST00000417702 STARD5Q9NSY2 213 aa14.78□□□□□ -0.04
NUP50-204ENST00000417702 INTS7Q9NVH2 962 aaKnown RBP14.78□□□□□ -0.04
NUP50-204ENST00000417702 IRAK4Q9NWZ3 460 aa14.78□□□□□ -0.04
NUP50-204ENST00000417702 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.78□□□□□ -0.04
NUP50-204ENST00000417702 TUBD1Q9UJT1 453 aa14.78□□□□□ -0.04
NUP50-204ENST00000417702 POLHQ9Y253 713 aa14.78□□□□□ -0.04
NUP50-204ENST00000417702 FARSAQ9Y285 508 aaKnown RBP14.78□□□□□ -0.04
NUP50-204ENST00000417702 HEMK1Q9Y5R4 338 aaPredicted RBP14.78□□□□□ -0.04
NUP50-204ENST00000417702 NFS1Q9Y697 457 aa14.78□□□□□ -0.04
NUP50-204ENST00000417702 SAR1BQ9Y6B6 198 aa14.78□□□□□ -0.04
NUP50-204ENST00000417702 AP1M2Q9Y6Q5 423 aa14.78□□□□□ -0.04
NUP50-204ENST00000417702 KALRNO60229 2985 aa14.77□□□□□ -0.04
NUP50-204ENST00000417702 ZNF749O43361 778 aa14.77□□□□□ -0.05
NUP50-204ENST00000417702 OR2B3O76000 313 aa14.77□□□□□ -0.05
NUP50-204ENST00000417702 C1orf105O95561 183 aa14.77□□□□□ -0.05
NUP50-204ENST00000417702 PGAM1P18669 254 aa14.77□□□□□ -0.05
NUP50-204ENST00000417702 PEBP1P30086 187 aaKnown RBP14.77□□□□□ -0.05
NUP50-204ENST00000417702 PAFAH1B1P43034 410 aa14.77□□□□□ -0.05
NUP50-204ENST00000417702 CTBP1Q13363 440 aa14.77□□□□□ -0.05
NUP50-204ENST00000417702 GRB7Q14451 532 aa14.77□□□□□ -0.05
NUP50-204ENST00000417702 ZIC1Q15915 447 aa14.77□□□□□ -0.05
NUP50-204ENST00000417702 TTLL9Q3SXZ7 439 aa14.77□□□□□ -0.05
NUP50-204ENST00000417702 ZNF789Q5FWF6 425 aa14.77□□□□□ -0.05
NUP50-204ENST00000417702 IZUMO3Q5VZ72 239 aa14.77□□□□□ -0.05
NUP50-204ENST00000417702 ZNF517Q6ZMY9 492 aaPredicted RBP14.77□□□□□ -0.05
NUP50-204ENST00000417702 SYDE1Q6ZW31 735 aaPredicted RBP14.77□□□□□ -0.05
NUP50-204ENST00000417702 SYVN1Q86TM6 617 aa14.77□□□□□ -0.05
NUP50-204ENST00000417702 DENND6AQ8IWF6 608 aa14.77□□□□□ -0.05
NUP50-204ENST00000417702 KLHL7Q8IXQ5 586 aa14.77□□□□□ -0.05
NUP50-204ENST00000417702 LINC01555Q8NAE3 123 aa14.77□□□□□ -0.05
NUP50-204ENST00000417702 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.77□□□□□ -0.05
NUP50-204ENST00000417702 GABPB2Q8TAK5 448 aaPredicted RBP14.77□□□□□ -0.05
NUP50-204ENST00000417702 FAM167BQ9BTA0 163 aa14.77□□□□□ -0.05
NUP50-204ENST00000417702 MENTQ9BUN1 341 aa14.77□□□□□ -0.05
NUP50-204ENST00000417702 TSR3Q9UJK0 312 aaKnown RBP14.77□□□□□ -0.05
NUP50-204ENST00000417702 PLCL2Q9UPR0 1127 aa14.77□□□□□ -0.05
NUP50-204ENST00000417702 FAM169AQ9Y6X4 670 aa14.77□□□□□ -0.05
NUP50-204ENST00000417702 FKBP9O95302 570 aa14.76□□□□□ -0.05
NUP50-204ENST00000417702 MAGP20916 626 aa14.76□□□□□ -0.05
NUP50-204ENST00000417702 AGXTP21549 392 aa14.76□□□□□ -0.05
NUP50-204ENST00000417702 RORAP35398 523 aa14.76□□□□□ -0.05
NUP50-204ENST00000417702 GBX1Q14549 363 aa14.76□□□□□ -0.05
NUP50-204ENST00000417702 SF1Q15637 639 aaKnown RBP14.76□□□□□ -0.05
NUP50-204ENST00000417702 DEFB110Q30KQ9 67 aa14.76□□□□□ -0.05
NUP50-204ENST00000417702 TLDC1Q6P9B6 456 aa14.76□□□□□ -0.05
NUP50-204ENST00000417702 CREG2Q8IUH2 290 aa14.76□□□□□ -0.05
NUP50-204ENST00000417702 SYTL1Q8IYJ3 562 aa14.76□□□□□ -0.05
NUP50-204ENST00000417702 AGGF1Q8N302 714 aaeCLIP14.76□□□□□ -0.05
NUP50-204ENST00000417702 C17orf53Q8N3J3 647 aaPredicted RBP14.76□□□□□ -0.05
NUP50-204ENST00000417702 DNAJC22Q8N4W6 341 aa14.76□□□□□ -0.05
NUP50-204ENST00000417702 TRIM44Q96DX7 344 aaPredicted RBP14.76□□□□□ -0.05
NUP50-204ENST00000417702 RUFY1Q96T51 708 aa14.76□□□□□ -0.05
NUP50-204ENST00000417702 DPH2Q9BQC3 489 aaPredicted RBP14.76□□□□□ -0.05
NUP50-204ENST00000417702 NAT9Q9BTE0 207 aa14.76□□□□□ -0.05
NUP50-204ENST00000417702 FBXO6Q9NRD1 293 aaPredicted RBP14.76□□□□□ -0.05
NUP50-204ENST00000417702 FAM114A2Q9NRY5 505 aa14.76□□□□□ -0.05
NUP50-204ENST00000417702 PCMTD2Q9NV79 361 aa14.76□□□□□ -0.05
NUP50-204ENST00000417702 SPATA7Q9P0W8 599 aa14.76□□□□□ -0.05
NUP50-204ENST00000417702 FBXO5Q9UKT4 447 aa14.76□□□□□ -0.05
NUP50-204ENST00000417702 RUVBL2Q9Y230 463 aaKnown RBP14.76□□□□□ -0.05
NUP50-204ENST00000417702 COMMD10Q9Y6G5 202 aa14.76□□□□□ -0.05
NUP50-204ENST00000417702 C9J4A7 227 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 ZSCAN9O15535 394 aaPredicted RBP14.75□□□□□ -0.05
NUP50-204ENST00000417702 MATN4O95460 622 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 TTC4O95801 387 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 RAB40ALP0C0E4 278 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 PLA2G2AP14555 144 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 SLC1A2P43004 574 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 PTGIRP43119 386 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 GABRA4P48169 554 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 RPS18P62269 152 aaKnown RBP14.75□□□□□ -0.05
NUP50-204ENST00000417702 DR1Q01658 176 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 DHX9Q08211 1270 aaKnown RBP14.75□□□□□ -0.05
NUP50-204ENST00000417702 KLHL38Q2WGJ6 581 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 PTCHD3Q3KNS1 767 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 HSP90AA5PQ58FG0 334 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 ACSBG2Q5FVE4 666 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 KCNMB4Q86W47 210 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 FAM20CQ8IXL6 584 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 LMNTD1Q8N9Z9 388 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 THAP4Q8WY91 577 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 KCNJ9Q92806 393 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 EBNA1BP2Q99848 306 aaKnown RBP14.75□□□□□ -0.05
NUP50-204ENST00000417702 C17orf62Q9BQA9 187 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 NLNQ9BYT8 704 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 SPRTNQ9H040 489 aaPredicted RBP14.75□□□□□ -0.05
NUP50-204ENST00000417702 IARS2Q9NSE4 1012 aaKnown RBP14.75□□□□□ -0.05
NUP50-204ENST00000417702 KLHL42Q9P2K6 505 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 GALPQ9UBC7 116 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 RNF14Q9UBS8 474 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 SNX7Q9UNH6 387 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 SRPK3Q9UPE1 567 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 MAN2B2Q9Y2E5 1009 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 KLHL20Q9Y2M5 609 aa14.75□□□□□ -0.05
NUP50-204ENST00000417702 KCNMB2Q9Y691 235 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms