RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 PADI4Q9UM07 663 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 PCDHA12Q9UN75 941 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 TNFSF13BQ9Y275 285 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 PCDHA13Q9Y5I0 950 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 RP1L1Q8IWN7 2480 aaPredicted RBP5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 CKAP5Q14008 2032 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 KIF26BQ2KJY2 2108 aa5.41□□□□□ -1.54
ECHDC1-206ENST00000417628 A0A0G2JNJ9 132 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 C1orf232A0A0U1RR37 186 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 MAGEB16A2A368 324 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 H3BQV1 296 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 PEX1O43933 1283 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 RAD1O60671 282 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 TMCC2O75069 709 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 ATP2C2O75185 946 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 RHOBTB3O94955 611 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 FYNP06241 537 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 DLATP10515 647 aaKnown RBP5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 IRF1P10914 325 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 ZNF3P17036 446 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 DDX5P17844 614 aaKnown RBP5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 CYP3A5P20815 502 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 CDH3P22223 829 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 CTSSP25774 331 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 HTR1BP28222 390 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 ADSLP30566 484 aaPredicted RBP5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 IFNA8P32881 189 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 ASMTP46597 345 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 LIMS1P48059 325 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 MEOX1P50221 254 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 PLTPP55058 493 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 GNG2P59768 71 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 LILRA4P59901 499 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 PPP2CBP62714 309 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 PPP2CAP67775 309 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 ECT2LQ008S8 904 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 GUCY2DQ02846 1103 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 PPP2R5CQ13362 524 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 NUMA1Q14980 2115 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 PSMD6Q15008 389 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 NOMO1Q15155 1222 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 TSC22D1Q15714 1073 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 PRR31Q5SQ13 230 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 ERMARDQ5T6L9 678 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 NT5DC1Q5TFE4 455 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 ZNF449Q6P9G9 518 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 ANGPTL8Q6UXH0 198 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 NPNTQ6UXI9 565 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 C4orf22Q6V702 233 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 ZNF704Q6ZNC4 412 aaPredicted RBP5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 PIK3AP1Q6ZUJ8 805 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 RAPH1Q70E73 1250 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 PARS2Q7L3T8 475 aaKnown RBP5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 ADGRG6Q86SQ4 1221 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 PRPF39Q86UA1 669 aaKnown RBP5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 PIK3C3Q8NEB9 887 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 EXD1Q8NHP7 514 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 ETNPPLQ8TBG4 499 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 SORCS1Q8WY21 1168 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 BORCS5Q969J3 196 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 TRIM63Q969Q1 353 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 HDAC10Q969S8 669 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 ARL8AQ96BM9 186 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 CCDC127Q96BQ5 260 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 SNRNP40Q96DI7 357 aaKnown RBP5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 ARL5BQ96KC2 179 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 C7orf26Q96N11 449 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 TSGA13Q96PP4 275 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 ZNF317Q96PQ6 595 aaPredicted RBP5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 ZNF184Q99676 751 aaPredicted RBP5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 GAL3ST1Q99999 423 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 CCDC77Q9BR77 488 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 B3GNT5Q9BYG0 378 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 TRIM15Q9C019 465 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 RBM38Q9H0Z9 239 aaKnown RBP5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 EPB41L4BQ9H329 900 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 PLEKHA5Q9HAU0 1116 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 TMBIM4Q9HC24 238 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 NLRC4Q9NPP4 1024 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 FARSBQ9NSD9 589 aaKnown RBP5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 ABCF3Q9NUQ8 709 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 TBC1D23Q9NUY8 699 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 NMRK1Q9NWW6 199 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 ELOVL2Q9NXB9 296 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 RNF14Q9UBS8 474 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 Q9UFV3 132 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 FBXO10Q9UK96 956 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 CDC42EP3Q9UKI2 254 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 FZD4Q9ULV1 537 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 UBQLN1Q9UMX0 589 aaKnown RBP5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 POLHQ9Y253 713 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 TMEM5Q9Y2B1 443 aa5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 CFAP20Q9Y6A4 193 aaKnown RBP5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.4□□□□□ -1.54
ECHDC1-206ENST00000417628 ANAPC1Q9H1A4 1944 aa5.4□□□□□ -1.55
ECHDC1-206ENST00000417628 SCN8AQ9UQD0 1980 aa5.4□□□□□ -1.55
ECHDC1-206ENST00000417628 A0A0G2JK05 382 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 WDR91A4D1P6 747 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 GOLGA8IPA6NC78 632 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms