RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 FASTKD3Q14CZ7 662 aaKnown RBP17.41■□□□□ 0.38
VCP-202ENST00000417448 BRD3Q15059 726 aa17.41■□□□□ 0.38
VCP-202ENST00000417448 ZNF517Q6ZMY9 492 aaPredicted RBP17.41■□□□□ 0.38
VCP-202ENST00000417448 CFAP206Q8IYR0 622 aa17.41■□□□□ 0.38
VCP-202ENST00000417448 AVL9Q8NBF6 648 aa17.41■□□□□ 0.38
VCP-202ENST00000417448 LRRN4CLQ8ND94 238 aa17.41■□□□□ 0.38
VCP-202ENST00000417448 BARD1Q99728 777 aaKnown RBP17.41■□□□□ 0.38
VCP-202ENST00000417448 TIMM29Q9BSF4 260 aa17.41■□□□□ 0.38
VCP-202ENST00000417448 CARD6Q9BX69 1037 aa17.41■□□□□ 0.38
VCP-202ENST00000417448 PDE7BQ9NP56 450 aa17.41■□□□□ 0.38
VCP-202ENST00000417448 GPR83Q9NYM4 423 aa17.41■□□□□ 0.38
VCP-202ENST00000417448 NTNG1Q9Y2I2 539 aa17.41■□□□□ 0.38
VCP-202ENST00000417448 ZCWPW2A0A1B0GU75 182 aa17.4■□□□□ 0.38
VCP-202ENST00000417448 IQCF5A8MTL0 148 aa17.4■□□□□ 0.38
VCP-202ENST00000417448 GPR89AB7ZAQ6 455 aa17.4■□□□□ 0.38
VCP-202ENST00000417448 CFAP99D6REC4 459 aa17.4■□□□□ 0.38
VCP-202ENST00000417448 VIPP01282 170 aa17.4■□□□□ 0.38
VCP-202ENST00000417448 TUBB4AP04350 444 aa17.4■□□□□ 0.38
VCP-202ENST00000417448 GPR89BP0CG08 455 aa17.4■□□□□ 0.38
VCP-202ENST00000417448 BRAFP15056 766 aa17.4■□□□□ 0.38
VCP-202ENST00000417448 CSE1LP55060 971 aaKnown RBP17.4■□□□□ 0.38
VCP-202ENST00000417448 GPS2Q13227 327 aa17.4■□□□□ 0.38
VCP-202ENST00000417448 ZNF789Q5FWF6 425 aa17.4■□□□□ 0.38
VCP-202ENST00000417448 CRB2Q5IJ48 1285 aa17.4■□□□□ 0.38
VCP-202ENST00000417448 KIAA0930Q6ICG6 404 aaPredicted RBP17.4■□□□□ 0.38
VCP-202ENST00000417448 LCN10Q6JVE6 187 aa17.4■□□□□ 0.38
VCP-202ENST00000417448 IRGCQ6NXR0 463 aa17.4■□□□□ 0.38
VCP-202ENST00000417448 C8orf74Q6P047 294 aa17.4■□□□□ 0.38
VCP-202ENST00000417448 ZGRF1Q86YA3 2104 aa17.4■□□□□ 0.38
VCP-202ENST00000417448 SLC38A9Q8NBW4 561 aa17.4■□□□□ 0.38
VCP-202ENST00000417448 LKAAEAR1Q8TD35 194 aa17.4■□□□□ 0.38
VCP-202ENST00000417448 INPP5DQ92835 1189 aa17.4■□□□□ 0.38
VCP-202ENST00000417448 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.4■□□□□ 0.385e-7■■■■■ 55
VCP-202ENST00000417448 SLC41A2Q96JW4 573 aa17.4■□□□□ 0.38
VCP-202ENST00000417448 EBNA1BP2Q99848 306 aaKnown RBP17.4■□□□□ 0.38
VCP-202ENST00000417448 PLAC1Q9HBJ0 212 aa17.4■□□□□ 0.38
VCP-202ENST00000417448 SEMA5BQ9P283 1151 aa17.4■□□□□ 0.38
VCP-202ENST00000417448 CFAP20Q9Y6A4 193 aaKnown RBP17.4■□□□□ 0.38
VCP-202ENST00000417448 MAGEB16A2A368 324 aa17.39■□□□□ 0.37
VCP-202ENST00000417448 OR52A4PA6NMU1 304 aa17.39■□□□□ 0.37
VCP-202ENST00000417448 EBLN1P0CF75 366 aa17.39■□□□□ 0.37
VCP-202ENST00000417448 IDSP22304 550 aa17.39■□□□□ 0.37
VCP-202ENST00000417448 PREPP48147 710 aa17.39■□□□□ 0.37
VCP-202ENST00000417448 PRLHRP49683 370 aa17.39■□□□□ 0.37
VCP-202ENST00000417448 CLCNKAP51800 687 aa17.39■□□□□ 0.37
VCP-202ENST00000417448 PLTPP55058 493 aa17.39■□□□□ 0.37
VCP-202ENST00000417448 PDIA2Q13087 525 aaKnown RBP17.39■□□□□ 0.37
VCP-202ENST00000417448 CTBP1Q13363 440 aa17.39■□□□□ 0.37
VCP-202ENST00000417448 ELOAQ14241 798 aaKnown RBP17.39■□□□□ 0.37
VCP-202ENST00000417448 GPR18Q14330 331 aa17.39■□□□□ 0.37
VCP-202ENST00000417448 KRTAP21-3Q3LHN1 58 aa17.39■□□□□ 0.37
VCP-202ENST00000417448 BCL7AQ4VC05 210 aa17.39■□□□□ 0.37
VCP-202ENST00000417448 DNAJC21Q5F1R6 531 aaKnown RBP17.39■□□□□ 0.37
VCP-202ENST00000417448 SP5Q6BEB4 398 aaPredicted RBP17.39■□□□□ 0.37
VCP-202ENST00000417448 NEPROQ6NW34 567 aa17.39■□□□□ 0.37
VCP-202ENST00000417448 DENND6AQ8IWF6 608 aa17.39■□□□□ 0.37
VCP-202ENST00000417448 KRT222Q8N1A0 295 aa17.39■□□□□ 0.37
VCP-202ENST00000417448 SPDYE1Q8NFV5 336 aaPredicted RBP17.39■□□□□ 0.37
VCP-202ENST00000417448 PEX13Q92968 403 aa17.39■□□□□ 0.37
VCP-202ENST00000417448 MR1Q95460 341 aa17.39■□□□□ 0.37
VCP-202ENST00000417448 FCRL4Q96PJ5 515 aa17.39■□□□□ 0.37
VCP-202ENST00000417448 WWP1Q9H0M0 922 aa17.39■□□□□ 0.37
VCP-202ENST00000417448 CHST8Q9H2A9 424 aa17.39■□□□□ 0.37
VCP-202ENST00000417448 C20orf96Q9NUD7 363 aaPredicted RBP17.39■□□□□ 0.37
VCP-202ENST00000417448 WHRNQ9P202 907 aa17.39■□□□□ 0.37
VCP-202ENST00000417448 SLC17A6Q9P2U8 582 aa17.39■□□□□ 0.37
VCP-202ENST00000417448 EPHA6Q9UF33 1036 aa17.39■□□□□ 0.37
VCP-202ENST00000417448 DMGDHQ9UI17 866 aaKnown RBP17.39■□□□□ 0.37
VCP-202ENST00000417448 UTP11Q9Y3A2 253 aaKnown RBP17.39■□□□□ 0.37
VCP-202ENST00000417448 SVILO95425 2214 aa17.39■□□□□ 0.37
VCP-202ENST00000417448 ANKRD12Q6UB98 2062 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 UBA6A0AVT1 1052 aaPredicted RBP17.38■□□□□ 0.37
VCP-202ENST00000417448 CTAGE15A4D2H0 777 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 MGAT4DA6NG13 374 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 NDUFS3O75489 264 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 CTAGE8P0CG41 777 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 ERVK-10P10266 1014 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 FMO4P31512 558 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 NSG1P42857 185 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 ARL4CP56559 192 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 GUCY2DQ02846 1103 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 CALCOCO2Q13137 446 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 ITIH4Q14624 930 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 ZRSR2Q15696 482 aaKnown RBP17.38■□□□□ 0.37
VCP-202ENST00000417448 HIF1AQ16665 826 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 DUS1LQ6P1R4 473 aaKnown RBP17.38■□□□□ 0.37
VCP-202ENST00000417448 CYB5D1Q6P9G0 228 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 ZDHHC24Q6UX98 284 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 CAPN12Q6ZSI9 719 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 CTAGE6Q86UF2 777 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 TRIM48Q8IWZ4 208 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 CTAGE4Q8IX94 777 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 PDIK1LQ8N165 341 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 MMGT1Q8N4V1 131 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 ENDOVQ8N8Q3 282 aaKnown RBP17.38■□□□□ 0.37
VCP-202ENST00000417448 SIDT2Q8NBJ9 832 aaKnown RBP17.38■□□□□ 0.37
VCP-202ENST00000417448 FAM136AQ96C01 138 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 ZDHHC12Q96GR4 267 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 CCM2Q9BSQ5 444 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 SLC40A1Q9NP59 571 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms