RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 IL17FQ96PD4 163 aa22.34■■□□□ 1.17
SMARCB1-205ENST00000417137 MENTQ9BUN1 341 aa22.34■■□□□ 1.17
SMARCB1-205ENST00000417137 SLC12A9Q9BXP2 914 aa22.34■■□□□ 1.17
SMARCB1-205ENST00000417137 TRIM54Q9BYV2 358 aa22.34■■□□□ 1.17
SMARCB1-205ENST00000417137 ASPSCR1Q9BZE9 553 aa22.34■■□□□ 1.17
SMARCB1-205ENST00000417137 PARVBQ9HBI1 364 aa22.34■■□□□ 1.17
SMARCB1-205ENST00000417137 GPAMQ9HCL2 828 aa22.34■■□□□ 1.17
SMARCB1-205ENST00000417137 FBXO8Q9NRD0 319 aa22.34■■□□□ 1.17
SMARCB1-205ENST00000417137 PMS2P1A4D2B8 440 aa22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 NVLO15381 856 aaKnown RBP22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 SYF2O95926 243 aaKnown RBP22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 HIST1H2AGP0C0S8 130 aaPredicted RBP22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 UGT2B7P16662 529 aa22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 ZNF37AP17032 561 aaPredicted RBP22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 HIST1H2ADP20671 130 aa22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 EFTUD2Q15029 972 aaKnown RBP eCLIP22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 CYP2A13Q16696 494 aa22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 SLC5A12Q1EHB4 618 aa22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 DCAF12Q5T6F0 453 aa22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 RASGRP3Q8IV61 690 aa22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 KDF1Q8NAX2 398 aaPredicted RBP22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 ZCCHC14Q8WYQ9 949 aaKnown RBP22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 USP7Q93009 1102 aa22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 MRRFQ96E11 262 aaKnown RBP22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 HIST1H2AHQ96KK5 128 aa22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 OR2A14Q96R47 310 aa22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 PKP4Q99569 1192 aa22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 HIST1H2AJQ99878 128 aa22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 ZPBPQ9BS86 351 aa22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 H2AFJQ9BTM1 129 aa22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 ASCL3Q9NQ33 180 aa22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 SPHK1Q9NYA1 384 aa22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 PCDHB11Q9Y5F2 797 aa22.33■■□□□ 1.17
SMARCB1-205ENST00000417137 CDRT15L2A8MXV6 281 aa22.32■■□□□ 1.16
SMARCB1-205ENST00000417137 FAM155BO75949 473 aa22.32■■□□□ 1.16
SMARCB1-205ENST00000417137 FKBP9O95302 570 aa22.32■■□□□ 1.16
SMARCB1-205ENST00000417137 TSPAN12O95859 305 aa22.32■■□□□ 1.16
SMARCB1-205ENST00000417137 ABHD2P08910 425 aa22.32■■□□□ 1.16
SMARCB1-205ENST00000417137 FAM153BP0C7A2 387 aa22.32■■□□□ 1.16
SMARCB1-205ENST00000417137 ETV5P41161 510 aa22.32■■□□□ 1.16
SMARCB1-205ENST00000417137 UAP1Q16222 522 aaPredicted RBP22.32■■□□□ 1.16
SMARCB1-205ENST00000417137 FAM153CQ494X1 144 aa22.32■■□□□ 1.16
SMARCB1-205ENST00000417137 CLEC14AQ86T13 490 aa22.32■■□□□ 1.16
SMARCB1-205ENST00000417137 CEP97Q8IW35 865 aa22.32■■□□□ 1.16
SMARCB1-205ENST00000417137 C2orf73Q8N5S3 287 aaPredicted RBP22.32■■□□□ 1.16
SMARCB1-205ENST00000417137 BMPERQ8N8U9 685 aa22.32■■□□□ 1.16
SMARCB1-205ENST00000417137 LINC01555Q8NAE3 123 aa22.32■■□□□ 1.16
SMARCB1-205ENST00000417137 CCDC138Q96M89 665 aa22.32■■□□□ 1.16
SMARCB1-205ENST00000417137 TEFMQ96QE5 360 aaKnown RBP22.32■■□□□ 1.16
SMARCB1-205ENST00000417137 DDA1Q9BW61 102 aa22.32■■□□□ 1.16
SMARCB1-205ENST00000417137 PITPNM3Q9BZ71 974 aa22.32■■□□□ 1.16
SMARCB1-205ENST00000417137 TWSG1Q9GZX9 223 aa22.32■■□□□ 1.16
SMARCB1-205ENST00000417137 ANKZF1Q9H8Y5 726 aa22.32■■□□□ 1.16
SMARCB1-205ENST00000417137 SOHLH2Q9NX45 425 aa22.32■■□□□ 1.16
SMARCB1-205ENST00000417137 PCDHGA3Q9Y5H0 932 aa22.32■■□□□ 1.16
SMARCB1-205ENST00000417137 SLC9B1P1A6NJY1 282 aa22.31■■□□□ 1.16
SMARCB1-205ENST00000417137 POLR1CO15160 346 aaPredicted RBP22.31■■□□□ 1.16
SMARCB1-205ENST00000417137 CAPNS1P04632 268 aa22.31■■□□□ 1.16
SMARCB1-205ENST00000417137 INHBAP08476 426 aa22.31■■□□□ 1.16
SMARCB1-205ENST00000417137 CRABP2P29373 138 aa22.31■■□□□ 1.16
SMARCB1-205ENST00000417137 OAS2P29728 719 aaKnown RBP22.31■■□□□ 1.16
SMARCB1-205ENST00000417137 SLC5A2P31639 672 aa22.31■■□□□ 1.16
SMARCB1-205ENST00000417137 PGGT1BP53609 377 aa22.31■■□□□ 1.16
SMARCB1-205ENST00000417137 RAB10P61026 200 aa22.31■■□□□ 1.16
SMARCB1-205ENST00000417137 ACY1Q03154 408 aa22.31■■□□□ 1.16
SMARCB1-205ENST00000417137 FOXM1Q08050 763 aa22.31■■□□□ 1.16
SMARCB1-205ENST00000417137 IL11RAQ14626 422 aa22.31■■□□□ 1.16
SMARCB1-205ENST00000417137 TMEM207Q6UWW9 146 aa22.31■■□□□ 1.16
SMARCB1-205ENST00000417137 CEACAM20Q6UY09 585 aa22.31■■□□□ 1.16
SMARCB1-205ENST00000417137 TAOK1Q7L7X3 1001 aa22.31■■□□□ 1.16
SMARCB1-205ENST00000417137 BPHLQ86WA6 291 aaPredicted RBP22.31■■□□□ 1.16
SMARCB1-205ENST00000417137 SPNS2Q8IVW8 549 aa22.31■■□□□ 1.16
SMARCB1-205ENST00000417137 D2HGDHQ8N465 521 aa22.31■■□□□ 1.16
SMARCB1-205ENST00000417137 DENND1AQ8TEH3 1009 aa22.31■■□□□ 1.16
SMARCB1-205ENST00000417137 SMPDL3AQ92484 453 aa22.31■■□□□ 1.16
SMARCB1-205ENST00000417137 CAB39LQ9H9S4 337 aa22.31■■□□□ 1.16
SMARCB1-205ENST00000417137 PDE7BQ9NP56 450 aa22.31■■□□□ 1.16
SMARCB1-205ENST00000417137 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.31■■□□□ 1.16
SMARCB1-205ENST00000417137 A0A0J9YY10 115 aa22.3■■□□□ 1.16
SMARCB1-205ENST00000417137 ENO2P09104 434 aaPredicted RBP22.3■■□□□ 1.16
SMARCB1-205ENST00000417137 ERGP11308 486 aa22.3■■□□□ 1.16
SMARCB1-205ENST00000417137 MSH2P43246 934 aa22.3■■□□□ 1.16
SMARCB1-205ENST00000417137 SERPINB9P50453 376 aa22.3■■□□□ 1.16
SMARCB1-205ENST00000417137 PNLIPRP1P54315 467 aa22.3■■□□□ 1.16
SMARCB1-205ENST00000417137 ZNF460Q14592 562 aa22.3■■□□□ 1.16
SMARCB1-205ENST00000417137 SF1Q15637 639 aaKnown RBP22.3■■□□□ 1.16
SMARCB1-205ENST00000417137 FBXO38Q6PIJ6 1188 aa22.3■■□□□ 1.16
SMARCB1-205ENST00000417137 RAPH1Q70E73 1250 aa22.3■■□□□ 1.16
SMARCB1-205ENST00000417137 SYTL1Q8IYJ3 562 aa22.3■■□□□ 1.16
SMARCB1-205ENST00000417137 SLC44A1Q8WWI5 657 aa22.3■■□□□ 1.16
SMARCB1-205ENST00000417137 PPM1MQ96MI6 270 aa22.3■■□□□ 1.16
SMARCB1-205ENST00000417137 TRAPPC9Q96Q05 1148 aa22.3■■□□□ 1.16
SMARCB1-205ENST00000417137 INTS7Q9NVH2 962 aaKnown RBP22.3■■□□□ 1.16
SMARCB1-205ENST00000417137 SIDT1Q9NXL6 827 aaKnown RBP22.3■■□□□ 1.16
SMARCB1-205ENST00000417137 ADAMTS6Q9UKP5 1117 aa22.3■■□□□ 1.16
SMARCB1-205ENST00000417137 PDE10AQ9Y233 779 aa22.3■■□□□ 1.16
SMARCB1-205ENST00000417137 BTRCQ9Y297 605 aa22.3■■□□□ 1.16
SMARCB1-205ENST00000417137 RIPK2O43353 540 aa22.29■■□□□ 1.16
SMARCB1-205ENST00000417137 SLC16A8O95907 504 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms