RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 NSG1P42857 185 aa9.63□□□□□ -0.87
MDC1-202ENST00000416571 CDKN1CP49918 316 aaPredicted RBP9.63□□□□□ -0.87
MDC1-202ENST00000416571 ARG2P78540 354 aa9.63□□□□□ -0.87
MDC1-202ENST00000416571 OTUD4Q01804 1114 aaKnown RBP9.63□□□□□ -0.87
MDC1-202ENST00000416571 PLOD1Q02809 727 aaPredicted RBP9.63□□□□□ -0.87
MDC1-202ENST00000416571 NKG7Q16617 165 aa9.63□□□□□ -0.87
MDC1-202ENST00000416571 ZNF658BQ4V348 819 aaPredicted RBP9.63□□□□□ -0.87
MDC1-202ENST00000416571 ANKRD20A2Q5SQ80 823 aa9.63□□□□□ -0.87
MDC1-202ENST00000416571 ANKRD20A1Q5TYW2 823 aa9.63□□□□□ -0.87
MDC1-202ENST00000416571 ANKRD20A3Q5VUR7 823 aa9.63□□□□□ -0.87
MDC1-202ENST00000416571 SHISA6Q6ZSJ9 500 aa9.63□□□□□ -0.87
MDC1-202ENST00000416571 GDF7Q7Z4P5 450 aa9.63□□□□□ -0.87
MDC1-202ENST00000416571 CDKL3Q8IVW4 592 aaPredicted RBP9.63□□□□□ -0.87
MDC1-202ENST00000416571 TMEM151BQ8IW70 566 aa9.63□□□□□ -0.87
MDC1-202ENST00000416571 RCOR2Q8IZ40 523 aa9.63□□□□□ -0.87
MDC1-202ENST00000416571 OR1N1Q8NGS0 311 aa9.63□□□□□ -0.87
MDC1-202ENST00000416571 OR5K2Q8NHB8 316 aa9.63□□□□□ -0.87
MDC1-202ENST00000416571 SLC22A18Q96BI1 424 aa9.63□□□□□ -0.87
MDC1-202ENST00000416571 DNAJC1Q96KC8 554 aaKnown RBP9.63□□□□□ -0.87
MDC1-202ENST00000416571 ALS2CR12Q96Q35 445 aa9.63□□□□□ -0.87
MDC1-202ENST00000416571 DNAJC7Q99615 494 aa9.63□□□□□ -0.87
MDC1-202ENST00000416571 SPSB2Q99619 263 aa9.63□□□□□ -0.87
MDC1-202ENST00000416571 SLX1AQ9BQ83 275 aa9.63□□□□□ -0.87
MDC1-202ENST00000416571 TBL1YQ9BQ87 522 aa9.63□□□□□ -0.87
MDC1-202ENST00000416571 GORASP1Q9BQQ3 440 aa9.63□□□□□ -0.87
MDC1-202ENST00000416571 C10orf88Q9H8K7 445 aa9.63□□□□□ -0.87
MDC1-202ENST00000416571 SEMA3GQ9NS98 782 aa9.63□□□□□ -0.87
MDC1-202ENST00000416571 CUTCQ9NTM9 273 aa9.63□□□□□ -0.87
MDC1-202ENST00000416571 INTS7Q9NVH2 962 aaKnown RBP9.63□□□□□ -0.87
MDC1-202ENST00000416571 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.63□□□□□ -0.87
MDC1-202ENST00000416571 FEZ2Q9UHY8 353 aaPredicted RBP9.63□□□□□ -0.87
MDC1-202ENST00000416571 PLAGL1Q9UM63 463 aa9.63□□□□□ -0.87
MDC1-202ENST00000416571 HS3ST3B1Q9Y662 390 aa9.63□□□□□ -0.87
MDC1-202ENST00000416571 TRBV5-4A0A0C4DH59 114 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 DYTNA2CJ06 578 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 F8W8V4 182 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 H7C0S8 307 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 DSCR3O14972 297 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 KCNN4O15554 427 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 OR56A5P0C7T3 313 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 GRNP28799 593 aaKnown RBP9.62□□□□□ -0.87
MDC1-202ENST00000416571 CARSP49589 748 aaKnown RBP9.62□□□□□ -0.87
MDC1-202ENST00000416571 CACNG1Q06432 222 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 MFAP5Q13361 173 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 ART3Q13508 389 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 GRM7Q14831 915 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 DBN1Q16643 649 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 FAM214AQ32MH5 1076 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 ZC3H12BQ5HYM0 836 aaKnown RBP9.62□□□□□ -0.87
MDC1-202ENST00000416571 TCTE1Q5JU00 501 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 YOD1Q5VVQ6 348 aaPredicted RBP9.62□□□□□ -0.87
MDC1-202ENST00000416571 RPUSD3Q6P087 351 aaKnown RBP9.62□□□□□ -0.87
MDC1-202ENST00000416571 KIRREL2Q6UWL6 708 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 GFRALQ6UXV0 394 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 BBS12Q6ZW61 710 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 MCATQ8IVS2 390 aaKnown RBP9.62□□□□□ -0.87
MDC1-202ENST00000416571 KATNAL2Q8IYT4 538 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 FLVCR1-AS1Q8TAF5 88 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 CCDC110Q8TBZ0 833 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 NANOS1Q8WY41 292 aaKnown RBP9.62□□□□□ -0.87
MDC1-202ENST00000416571 LMF1Q96S06 567 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 CRB3Q9BUF7 120 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 HEMGNQ9BXL5 484 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 SLC26A1Q9H2B4 701 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 NHEJ1Q9H9Q4 299 aaPredicted RBP9.62□□□□□ -0.87
MDC1-202ENST00000416571 SLC22A11Q9NSA0 550 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 IL1RAPL1Q9NZN1 696 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 KLF2Q9Y5W3 355 aaPredicted RBP9.62□□□□□ -0.87
MDC1-202ENST00000416571 ALG6Q9Y672 507 aa9.62□□□□□ -0.87
MDC1-202ENST00000416571 TRGV8A0A0C4DH27 118 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 SYCE3A1L190 88 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 MAP2K7O14733 419 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 HPP00738 406 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 RPN2P04844 631 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 PRSS56P0CW18 603 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 RBP3P10745 1247 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 ACPPP15309 386 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 ACADLP28330 430 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 PEBP1P30086 187 aaKnown RBP9.61□□□□□ -0.87
MDC1-202ENST00000416571 PTGER4P35408 488 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 RAB28P51157 221 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 CSE1LP55060 971 aaKnown RBP9.61□□□□□ -0.87
MDC1-202ENST00000416571 KCNK10P57789 538 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 EIF3EP60228 445 aaKnown RBP9.61□□□□□ -0.87
MDC1-202ENST00000416571 OCA2Q04671 838 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 SPARCL1Q14515 664 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 ITIH4Q14624 930 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 MTFR2Q6P444 385 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 DARS2Q6PI48 645 aaKnown RBP9.61□□□□□ -0.87
MDC1-202ENST00000416571 NLRP9Q7RTR0 991 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 TAX1BP1Q86VP1 789 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 FAM20CQ8IXL6 584 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 METTL27Q8N6F8 245 aaPredicted RBP9.61□□□□□ -0.87
MDC1-202ENST00000416571 CATSPER1Q8NEC5 780 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 OR11G2Q8NGC1 345 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 ACTL9Q8TC94 416 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.61□□□□□ -0.87
MDC1-202ENST00000416571 NR4A3Q92570 626 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 RELTQ969Z4 430 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 CDKN2AIPNLQ96HQ2 116 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms