RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 IQCF5A8MTL0 148 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 FADS2P1A8MWK0 482 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 BTN3A1O00481 513 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 STX16O14662 325 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 KLK8O60259 260 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 RECQL5O94762 991 aaPredicted RBP11.3□□□□□ -0.6
RFFL-205ENST00000415395 FTH1P02794 183 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 MTHFD2P13995 350 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 MSH3P20585 1137 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 ATP6V1B2P21281 511 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 AKT1P31749 480 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 DRD3P35462 400 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 EEFSECP57772 596 aaKnown RBP11.3□□□□□ -0.6
RFFL-205ENST00000415395 MLLT1Q03111 559 aaPredicted RBP11.3□□□□□ -0.6
RFFL-205ENST00000415395 AGERQ15109 404 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 SMAD2Q15796 467 aaKnown RBP11.3□□□□□ -0.6
RFFL-205ENST00000415395 PPP1R3AQ16821 1122 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 TBC1D25Q3MII6 688 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 UNC50Q53HI1 259 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 GPR153Q6NV75 609 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 PROSER1Q86XN7 944 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 PHYKPLQ8IUZ5 450 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 HOMEZQ8IX15 550 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 DDIASQ8IXT1 998 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 CBR4Q8N4T8 237 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 CLDN19Q8N6F1 224 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 TRPV3Q8NET8 790 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 TWIST2Q8WVJ9 160 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 FUBP1Q96AE4 644 aaKnown RBP11.3□□□□□ -0.6
RFFL-205ENST00000415395 NRBF2Q96F24 287 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 SLC29A1Q99808 456 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 WRAP53Q9BUR4 548 aaKnown RBP11.3□□□□□ -0.6
RFFL-205ENST00000415395 ZCCHC2Q9C0B9 1178 aaKnown RBP11.3□□□□□ -0.6
RFFL-205ENST00000415395 AKTIPQ9H8T0 292 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 SARS2Q9NP81 518 aaKnown RBP11.3□□□□□ -0.6
RFFL-205ENST00000415395 MID1IP1Q9NPA3 183 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 LIMD1Q9UGP4 676 aa11.3□□□□□ -0.6
RFFL-205ENST00000415395 SAC3D1A6NKF1 404 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 SOX1O00570 391 aaPredicted RBP11.29□□□□□ -0.6
RFFL-205ENST00000415395 SOCS2O14508 198 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 GIPC1O14908 333 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 MID1O15344 667 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 CLOCKO15516 846 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 LZTS3O60299 673 aaPredicted RBP11.29□□□□□ -0.6
RFFL-205ENST00000415395 TRIM16O95361 564 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 EGFP01133 1207 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 CAPGP40121 348 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 KCNC1P48547 511 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 SEC13P55735 322 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 SFSWAPQ12872 951 aaKnown RBP11.29□□□□□ -0.6
RFFL-205ENST00000415395 GBX1Q14549 363 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 PON2Q15165 354 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 TSNQ15631 228 aaKnown RBP11.29□□□□□ -0.6
RFFL-205ENST00000415395 SLC36A3Q495N2 470 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 PLEKHS1Q5SXH7 462 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 AGBL4Q5VU57 503 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 OGFOD2Q6N063 350 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 SPRED1Q7Z699 444 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 PATL1Q86TB9 770 aaKnown RBP11.29□□□□□ -0.6
RFFL-205ENST00000415395 ZNF554Q86TJ5 538 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 CLVS1Q8IUQ0 354 aaPredicted RBP11.29□□□□□ -0.6
RFFL-205ENST00000415395 DHRSXQ8N5I4 330 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 PTGR2Q8N8N7 351 aaPredicted RBP11.29□□□□□ -0.6
RFFL-205ENST00000415395 IL17RCQ8NAC3 791 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 FNDC8Q8TC99 324 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 LKAAEAR1Q8TD35 194 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 TUBGCP3Q96CW5 907 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 CCDC97Q96F63 343 aaPredicted RBP11.29□□□□□ -0.6
RFFL-205ENST00000415395 C1QTNF3Q9BXJ4 246 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 SLC2A4RGQ9NR83 387 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 SDR39U1Q9NRG7 319 aaPredicted RBP11.29□□□□□ -0.6
RFFL-205ENST00000415395 HEBP1Q9NRV9 189 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 RIC8BQ9NVN3 520 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 NUDT4Q9NZJ9 180 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 LEF1Q9UJU2 399 aaPredicted RBP11.29□□□□□ -0.6
RFFL-205ENST00000415395 ANAPC2Q9UJX6 822 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 SZT2Q5T011 3432 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 MYOCOSA0A1B0GUC4 107 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 SH3PXD2BA1X283 911 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 NPEPPSL1A6NEC2 478 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 TRIM64A6NGJ6 449 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 SUPT3HB4E1H0 165 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 CDC7O00311 574 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 NME4O00746 187 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 ARPC2O15144 300 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 CBFA2T3O75081 653 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 SUPT3HO75486 399 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 LDLRP01130 860 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 GSTM1P09488 218 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 IMPDH2P12268 514 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 GFAPP14136 432 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 AOAHP28039 575 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 TEAD1P28347 426 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 PCSK6P29122 969 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 WASP42768 502 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 CCT8P50990 548 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 RPS14P62263 151 aaKnown RBP11.29□□□□□ -0.6
RFFL-205ENST00000415395 GSTM4Q03013 218 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 LCP2Q13094 533 aa11.29□□□□□ -0.6
RFFL-205ENST00000415395 NFYCQ13952 458 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms