RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 CES4AQ5XG92 561 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 AGTRAPQ6RW13 159 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 FRA10AC1Q70Z53 315 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 C10orf107Q8IVU9 208 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 ARFGAP2Q8N6H7 521 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 OR6C4Q8NGE1 309 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 OR2L8Q8NGY9 312 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 FLVCR1-AS1Q8TAF5 88 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 ATL1Q8WXF7 558 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 SH3KBP1Q96B97 665 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 APOLD1Q96LR9 279 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 NRTNQ99748 197 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 GTPBP2Q9BX10 602 aaKnown RBP12.88□□□□□ -0.35
CNN3-203ENST00000415017 RAB11FIP5Q9BXF6 653 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 CD244Q9BZW8 370 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 OR6C2Q9NZP2 312 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 NCKIPSDQ9NZQ3 722 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 CD274Q9NZQ7 290 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 NCDNQ9UBB6 729 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 DOLKQ9UPQ8 538 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 ASB1Q9Y576 335 aa12.88□□□□□ -0.35
CNN3-203ENST00000415017 UNC13CQ8NB66 2214 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 TRBV23OR9-2A0A075B6M9 112 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 EME2A4GXA9 379 aaPredicted RBP12.87□□□□□ -0.35
CNN3-203ENST00000415017 SUPT3HB4E1H0 165 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 KLF11O14901 512 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 FLRT2O43155 660 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 CBFA2T3O75081 653 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 SUPT3HO75486 399 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 GUCA1CO95843 209 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 CKMT1AP12532 417 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 EPORP19235 508 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 KCNA4P22459 653 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 OAS2P29728 719 aaKnown RBP12.87□□□□□ -0.35
CNN3-203ENST00000415017 SHMT2P34897 504 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 GRK6P43250 576 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 GPR3P46089 330 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 PNLIPRP1P54315 467 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 EPHA4P54764 986 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 NAA20P61599 178 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 HERVK_113P63132 956 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 PRKG2Q13237 762 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 SUZ12Q15022 739 aaKnown RBP12.87□□□□□ -0.35
CNN3-203ENST00000415017 PFKFB4Q16877 469 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 UNC50Q53HI1 259 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 ZNF678Q5SXM1 525 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 LIPMQ5VYY2 423 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 ANKS6Q68DC2 871 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 RGS9BPQ6ZS82 235 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 ASCL5Q7RTU5 278 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 ADGRF3Q8IZF5 1079 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 FBXO39Q8N4B4 442 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 PTGR2Q8N8N7 351 aaPredicted RBP12.87□□□□□ -0.35
CNN3-203ENST00000415017 RAB3IL1Q8TBN0 382 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 ZNF483Q8TF39 744 aaPredicted RBP12.87□□□□□ -0.35
CNN3-203ENST00000415017 TMEM237Q96Q45 408 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 PHOX2BQ99453 314 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 SELENOSQ9BQE4 189 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 HGH1Q9BTY7 390 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 MECRQ9BV79 373 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 EDEM2Q9BV94 578 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 ERVK-6Q9BXR3 956 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.87□□□□□ -0.35
CNN3-203ENST00000415017 RAB33BQ9H082 229 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 TMEM9BQ9NQ34 198 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 INTS7Q9NVH2 962 aaKnown RBP12.87□□□□□ -0.35
CNN3-203ENST00000415017 NKIRAS1Q9NYS0 192 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 OGFRQ9NZT2 677 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 BTBD3Q9Y2F9 522 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 TNPO3Q9Y5L0 923 aaKnown RBP12.87□□□□□ -0.35
CNN3-203ENST00000415017 RNF215Q9Y6U7 377 aa12.87□□□□□ -0.35
CNN3-203ENST00000415017 E2F3O00716 465 aa12.86□□□□□ -0.35
CNN3-203ENST00000415017 KDM1AO60341 852 aa12.86□□□□□ -0.35
CNN3-203ENST00000415017 TRIM13O60858 407 aa12.86□□□□□ -0.35
CNN3-203ENST00000415017 SIX3O95343 332 aaPredicted RBP12.86□□□□□ -0.35
CNN3-203ENST00000415017 PEBP1P30086 187 aaKnown RBP12.86□□□□□ -0.35
CNN3-203ENST00000415017 AGTR2P50052 363 aa12.86□□□□□ -0.35
CNN3-203ENST00000415017 LIMK1P53667 647 aa12.86□□□□□ -0.35
CNN3-203ENST00000415017 GALNT1Q10472 559 aaPredicted RBP12.86□□□□□ -0.35
CNN3-203ENST00000415017 FASTKQ14296 549 aaKnown RBP12.86□□□□□ -0.35
CNN3-203ENST00000415017 C18orf21Q32NC0 220 aaPredicted RBP12.86□□□□□ -0.35
CNN3-203ENST00000415017 PTCHD3Q3KNS1 767 aa12.86□□□□□ -0.35
CNN3-203ENST00000415017 ATG14Q6ZNE5 492 aa12.86□□□□□ -0.35
CNN3-203ENST00000415017 PIP4P1Q86T03 277 aa12.86□□□□□ -0.35
CNN3-203ENST00000415017 AMIGO1Q86WK6 493 aa12.86□□□□□ -0.35
CNN3-203ENST00000415017 EID2Q8N6I1 236 aa12.86□□□□□ -0.35
CNN3-203ENST00000415017 ANKRD42Q8N9B4 389 aa12.86□□□□□ -0.35
CNN3-203ENST00000415017 FAM76AQ8TAV0 307 aa12.86□□□□□ -0.35
CNN3-203ENST00000415017 SETD7Q8WTS6 366 aaKnown RBP12.86□□□□□ -0.35
CNN3-203ENST00000415017 CKAP2Q8WWK9 683 aa12.86□□□□□ -0.35
CNN3-203ENST00000415017 IL17FQ96PD4 163 aa12.86□□□□□ -0.35
CNN3-203ENST00000415017 OR4K3Q96R72 315 aa12.86□□□□□ -0.35
CNN3-203ENST00000415017 GATA5Q9BWX5 397 aaPredicted RBP12.86□□□□□ -0.35
CNN3-203ENST00000415017 PITPNM3Q9BZ71 974 aa12.86□□□□□ -0.35
CNN3-203ENST00000415017 GSTO2Q9H4Y5 243 aa12.86□□□□□ -0.35
CNN3-203ENST00000415017 CCDC134Q9H6E4 229 aa12.86□□□□□ -0.35
CNN3-203ENST00000415017 ZBTB26Q9HCK0 441 aa12.86□□□□□ -0.35
CNN3-203ENST00000415017 LRIT1Q9P2V4 623 aa12.86□□□□□ -0.35
CNN3-203ENST00000415017 LNPEPQ9UIQ6 1025 aa12.86□□□□□ -0.35
CNN3-203ENST00000415017 PCTPQ9UKL6 214 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms