RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 P2RY12Q9H244 342 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 TDRD3Q9H7E2 651 aaKnown RBP2.51□□□□□ -2.01
MCF2-204ENST00000414978 TMEM206Q9H813 350 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 ECT2Q9H8V3 914 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 CPNE5Q9HCH3 593 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 NCKIPSDQ9NZQ3 722 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 FBXO40Q9UH90 709 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 TECTAO75443 2155 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 MYH7BA7E2Y1 1941 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 ANKDD1BA6NHY2 528 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 USP17L23D6RBM5 183 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 F8WDY8 70 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 MT-CYBP00156 380 aaPredicted RBP2.51□□□□□ -2.01
MCF2-204ENST00000414978 EGFP01133 1207 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 FGBP02675 491 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 VIMP08670 466 aaKnown RBP2.51□□□□□ -2.01
MCF2-204ENST00000414978 UROSP10746 265 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 DDX5P17844 614 aaKnown RBP2.51□□□□□ -2.01
MCF2-204ENST00000414978 MATN1P21941 496 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 ANP32AP39687 249 aaKnown RBP2.51□□□□□ -2.01
MCF2-204ENST00000414978 CCT8P50990 548 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 LINC00310P59036 64 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 CEBPEQ15744 281 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 CCDC183Q5T5S1 534 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 LRIG3Q6UXM1 1119 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 TMEM182Q6ZP80 229 aaPredicted RBP2.51□□□□□ -2.01
MCF2-204ENST00000414978 LRRC55Q6ZSA7 311 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 ERASQ7Z444 233 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 MRGPREQ86SM8 312 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 PEG10Q86TG7 708 aaKnown RBP2.51□□□□□ -2.01
MCF2-204ENST00000414978 RASGEF1CQ8N431 466 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 BCAS4Q8TDM0 211 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 SLC25A43Q8WUT9 341 aaPredicted RBP2.51□□□□□ -2.01
MCF2-204ENST00000414978 CAVIN3Q969G5 261 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 CTAGE1Q96RT6 745 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 FAM118BQ9BPY3 351 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 RTN4RQ9BZR6 473 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 SEMA6AQ9H2E6 1030 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 SNX25Q9H3E2 840 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 VCPKMTQ9H867 229 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 PRMT8Q9NR22 394 aaPredicted RBP2.51□□□□□ -2.01
MCF2-204ENST00000414978 FLRT1Q9NZU1 646 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 LARSQ9P2J5 1176 aaKnown RBP2.51□□□□□ -2.01
MCF2-204ENST00000414978 STK39Q9UEW8 545 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 ERVK-11Q9UQG0 969 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 HBS1LQ9Y450 684 aaKnown RBP2.51□□□□□ -2.01
MCF2-204ENST00000414978 CHST2Q9Y4C5 530 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 PCDHAC2Q9Y5I4 1007 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 PCNTO95613 3336 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 SMCHD1A6NHR9 2005 aa2.51□□□□□ -2.01
MCF2-204ENST00000414978 AP5Z1O43299 807 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 RIPK2O43353 540 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 PEX10O60683 326 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 HSF2BPO75031 334 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 PNPP00491 289 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 STAG3L1P0CL83 205 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 APEHP13798 732 aaKnown RBP2.5□□□□□ -2.01
MCF2-204ENST00000414978 AKR1A1P14550 325 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 MYL6BP14649 208 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 UGT1A6P19224 532 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 ITIH1P19827 911 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 TGM2P21980 687 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 PAX7P23759 505 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 MXI1P50539 228 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 RHAGQ02094 409 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 MYLK3Q32MK0 819 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 MCMDC2Q4G0Z9 681 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 IQCCQ4KMZ1 466 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 ESCO2Q56NI9 601 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 FAM69BQ5VUD6 431 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 OR6B2Q6IFH4 312 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 SARM1Q6SZW1 724 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 SEPT14Q6ZU15 432 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 G2E3Q7L622 706 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 ATG9AQ7Z3C6 839 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 HAUS6Q7Z4H7 955 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 LDB1Q86U70 411 aaPredicted RBP2.5□□□□□ -2.01
MCF2-204ENST00000414978 VRK3Q8IV63 474 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 AQP12AQ8IXF9 295 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 GALNT16Q8N428 558 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 CLEC1AQ8NC01 280 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 DENND6BQ8NEG7 585 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 NSMAFQ92636 917 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 SYN2Q92777 582 aaPredicted RBP2.5□□□□□ -2.01
MCF2-204ENST00000414978 KAT2BQ92831 832 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 ERLEC1Q96DZ1 483 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 CARD6Q9BX69 1037 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 TRIM6Q9C030 488 aaPredicted RBP2.5□□□□□ -2.01
MCF2-204ENST00000414978 SLC39A8Q9C0K1 460 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 KLHL1Q9NR64 748 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 ANO10Q9NW15 660 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 AURKCQ9UQB9 309 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 KCNK6Q9Y257 313 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 MCM3APO60318 1980 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 KIF26AQ9ULI4 1882 aaPredicted RBP2.5□□□□□ -2.01
MCF2-204ENST00000414978 EPOPA6NHQ4 379 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 RHODO00212 210 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 PPEF2O14830 753 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 MOCS3O95396 460 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 PTPN6P29350 595 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms