RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 A0A1W2PNU3 283 aaPredicted RBP14.16□□□□□ -0.14
LIMS1-206ENST00000414829 ISM1B1AKI9 464 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 STMND1H3BQB6 276 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 BTN3A3O00478 584 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 SLU7O95391 586 aaKnown RBP14.16□□□□□ -0.14
LIMS1-206ENST00000414829 ACSL3O95573 720 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 INHBAP08476 426 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 F7P08709 466 aaPredicted RBP14.16□□□□□ -0.14
LIMS1-206ENST00000414829 ERGP11308 486 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 FGF3P11487 239 aaPredicted RBP14.16□□□□□ -0.14
LIMS1-206ENST00000414829 HGFP14210 728 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 UGT2B7P16662 529 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 ITIH1P19827 911 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 SAT1P21673 171 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 CCND1P24385 295 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 CNTFP26441 200 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 CRABP2P29373 138 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 ABCG1P45844 678 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 SEPHS1P49903 392 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 TUBB3Q13509 450 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 CYP2A13Q16696 494 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 FBXO38Q6PIJ6 1188 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 ADAMTSL2Q86TH1 951 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 D2HGDHQ8N465 521 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 BMPERQ8N8U9 685 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 EEF1AKMT1Q8WVE0 214 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 ATL1Q8WXF7 558 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 TCTN2Q96GX1 697 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 CNTNAP3BQ96NU0 1288 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 CNTNAP3Q9BZ76 1288 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 TWSG1Q9GZX9 223 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 PCBD2Q9H0N5 130 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 PARVBQ9HBI1 364 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 SMYD2Q9NRG4 433 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 TSR3Q9UJK0 312 aaKnown RBP14.16□□□□□ -0.14
LIMS1-206ENST00000414829 PLAGL1Q9UM63 463 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 RUVBL2Q9Y230 463 aaKnown RBP14.16□□□□□ -0.14
LIMS1-206ENST00000414829 PTPRBP23467 1997 aa14.16□□□□□ -0.14
LIMS1-206ENST00000414829 IGHV5-51A0A0C4DH38 117 aa14.15□□□□□ -0.14
LIMS1-206ENST00000414829 CCDC189A1A4V9 331 aa14.15□□□□□ -0.14
LIMS1-206ENST00000414829 CXorf49A8MYA2 514 aaPredicted RBP14.15□□□□□ -0.14
LIMS1-206ENST00000414829 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.15□□□□□ -0.14
LIMS1-206ENST00000414829 SYF2O95926 243 aaKnown RBP14.15□□□□□ -0.14
LIMS1-206ENST00000414829 C1QAP02745 245 aa14.15□□□□□ -0.14
LIMS1-206ENST00000414829 CCL4P13236 92 aa14.15□□□□□ -0.14
LIMS1-206ENST00000414829 OAS2P29728 719 aaKnown RBP14.15□□□□□ -0.14
LIMS1-206ENST00000414829 SLC5A2P31639 672 aa14.15□□□□□ -0.14
LIMS1-206ENST00000414829 SLC26A3P40879 764 aa14.15□□□□□ -0.14
LIMS1-206ENST00000414829 SERPINB9P50453 376 aa14.15□□□□□ -0.14
LIMS1-206ENST00000414829 TAS2R39P59534 338 aa14.15□□□□□ -0.14
LIMS1-206ENST00000414829 FOXM1Q08050 763 aa14.15□□□□□ -0.14
LIMS1-206ENST00000414829 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.15□□□□□ -0.14
LIMS1-206ENST00000414829 LRRC69Q6ZNQ3 347 aa14.15□□□□□ -0.14
LIMS1-206ENST00000414829 PPP1R3BQ86XI6 285 aa14.15□□□□□ -0.14
LIMS1-206ENST00000414829 RASGRP3Q8IV61 690 aa14.15□□□□□ -0.14
LIMS1-206ENST00000414829 SYTL1Q8IYJ3 562 aa14.15□□□□□ -0.14
LIMS1-206ENST00000414829 C19orf47Q8N9M1 422 aaKnown RBP14.15□□□□□ -0.14
LIMS1-206ENST00000414829 N4BP2L2Q92802 583 aaPredicted RBP14.15□□□□□ -0.14
LIMS1-206ENST00000414829 USP7Q93009 1102 aa14.15□□□□□ -0.14
LIMS1-206ENST00000414829 CCDC138Q96M89 665 aa14.15□□□□□ -0.14
LIMS1-206ENST00000414829 OR2A14Q96R47 310 aa14.15□□□□□ -0.14
LIMS1-206ENST00000414829 OLFM1Q99784 485 aa14.15□□□□□ -0.14
LIMS1-206ENST00000414829 MENTQ9BUN1 341 aa14.15□□□□□ -0.14
LIMS1-206ENST00000414829 DPH1Q9BZG8 443 aa14.15□□□□□ -0.14
LIMS1-206ENST00000414829 RARRES3Q9UL19 164 aa14.15□□□□□ -0.14
LIMS1-206ENST00000414829 NOVA2Q9UNW9 492 aaKnown RBP14.15□□□□□ -0.14
LIMS1-206ENST00000414829 KIF1CO43896 1103 aaKnown RBP14.14□□□□□ -0.15
LIMS1-206ENST00000414829 PRAMEF10O60809 474 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 KRT38O76015 456 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 TSPAN12O95859 305 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 SLC16A8O95907 504 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 TUBBP07437 444 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 CMPK1P30085 196 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 RPA3P35244 121 aaPredicted RBP14.14□□□□□ -0.15
LIMS1-206ENST00000414829 ATP1A2P50993 1020 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 PMS2P54278 862 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 PNLIPRP1P54315 467 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 UCNP55089 124 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 RAB10P61026 200 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 ATP6V0D1P61421 351 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 PPP1CAP62136 330 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 TIAL1Q01085 375 aaKnown RBP eCLIP14.14□□□□□ -0.15
LIMS1-206ENST00000414829 GRB7Q14451 532 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 SF1Q15637 639 aaKnown RBP14.14□□□□□ -0.15
LIMS1-206ENST00000414829 ZKSCAN8Q15776 578 aaPredicted RBP14.14□□□□□ -0.15
LIMS1-206ENST00000414829 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.14□□□□□ -0.15
LIMS1-206ENST00000414829 TAF1BQ53T94 588 aaPredicted RBP14.14□□□□□ -0.15
LIMS1-206ENST00000414829 LGSNQ5TDP6 509 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 CYHR1Q6ZMK1 362 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 FRA10AC1Q70Z53 315 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 LINC01555Q8NAE3 123 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 KCNE4Q8WWG9 221 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 OR6C1Q96RD1 312 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 DERL2Q9GZP9 239 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 PPCSQ9HAB8 311 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 FGF21Q9NSA1 209 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 OCIAD1Q9NX40 245 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.14□□□□□ -0.15
LIMS1-206ENST00000414829 ANKMY1Q9P2S6 941 aa14.14□□□□□ -0.15
LIMS1-206ENST00000414829 ZNF180Q9UJW8 692 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms