RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 EDN3P14138 238 aa13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 ITGAXP20702 1163 aa13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 CTNNA1P35221 906 aaKnown RBP13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 GCGRP47871 477 aa13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 CSE1LP55060 971 aaKnown RBP13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 PLOD1Q02809 727 aaPredicted RBP13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 ITIH4Q14624 930 aa13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 ZNF169Q14929 603 aaPredicted RBP13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 ZRSR2Q15696 482 aaKnown RBP13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 NKG7Q16617 165 aa13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 KCTD11Q693B1 232 aa13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 KIRREL2Q6UWL6 708 aa13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 IGFL2Q6UWQ7 119 aa13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 SHISA6Q6ZSJ9 500 aa13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 ARHGEF18Q6ZSZ5 1173 aa13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 KLHDC8BQ8IXV7 354 aa13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 C2orf73Q8N5S3 287 aaPredicted RBP13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 LMNTD1Q8N9Z9 388 aa13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 DENND1AQ8TEH3 1009 aa13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 COG1Q8WTW3 980 aa13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 STYXQ8WUJ0 223 aa13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 MARVELD3Q96A59 401 aa13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 FKBP10Q96AY3 582 aa13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 WDR54Q9H977 334 aa13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 PIH1D1Q9NWS0 290 aaKnown RBP13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 IMPACTQ9P2X3 320 aa13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 PCDHA3Q9Y5H8 950 aa13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 PCDHA13Q9Y5I0 950 aa13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 HS3ST3B1Q9Y662 390 aa13.68□□□□□ -0.22
HLA-DQB2-229ENST00000411527 LRBAP50851 2863 aa13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 CNTRLQ7Z7A1 2325 aa13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 OR51F1A6NGY5 319 aa13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 E2F3O00716 465 aa13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 DSCR3O14972 297 aa13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 HNRNPRO43390 633 aaKnown RBP13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 ZG16O60844 167 aa13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 ONECUT2O95948 504 aa13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 ALBP02768 609 aa13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 OR56A5P0C7T3 313 aa13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 MSNP26038 577 aaKnown RBP13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 GRIA3P42263 894 aa13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 PARP6Q2NL67 630 aa13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 TUBB8Q3ZCM7 444 aa13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 SP5Q6BEB4 398 aaPredicted RBP13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 PACS1Q6VY07 963 aa13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 THOC3Q96J01 351 aaKnown RBP13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 SPSB2Q99619 263 aa13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 LHPPQ9H008 270 aa13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 SLC26A1Q9H2B4 701 aa13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 SOX17Q9H6I2 414 aaPredicted RBP13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 EPS8L2Q9H6S3 715 aa13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 LRRC40Q9H9A6 602 aa13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 MRM3Q9HC36 420 aaKnown RBP13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 CUTCQ9NTM9 273 aa13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 CIDEBQ9UHD4 219 aa13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 ENTPD4Q9Y227 616 aa13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 SVILO95425 2214 aa13.67□□□□□ -0.22
HLA-DQB2-229ENST00000411527 OR1I1O60431 355 aa13.66□□□□□ -0.22
HLA-DQB2-229ENST00000411527 METTL18O95568 372 aa13.66□□□□□ -0.22
HLA-DQB2-229ENST00000411527 PRF1P14222 555 aa13.66□□□□□ -0.22
HLA-DQB2-229ENST00000411527 MCM3P25205 808 aa13.66□□□□□ -0.22
HLA-DQB2-229ENST00000411527 ELAVL4P26378 380 aaKnown RBP13.66□□□□□ -0.22
HLA-DQB2-229ENST00000411527 PKLRP30613 574 aa13.66□□□□□ -0.22
HLA-DQB2-229ENST00000411527 PTPN7P35236 360 aa13.66□□□□□ -0.22
HLA-DQB2-229ENST00000411527 CETN2P41208 172 aa13.66□□□□□ -0.22
HLA-DQB2-229ENST00000411527 RAB28P51157 221 aa13.66□□□□□ -0.22
HLA-DQB2-229ENST00000411527 NAA30Q147X3 362 aaPredicted RBP13.66□□□□□ -0.22
HLA-DQB2-229ENST00000411527 TLR1Q15399 786 aa13.66□□□□□ -0.22
HLA-DQB2-229ENST00000411527 RBBP7Q16576 425 aa13.66□□□□□ -0.22
HLA-DQB2-229ENST00000411527 B3GNTL1Q67FW5 361 aaPredicted RBP13.66□□□□□ -0.22
HLA-DQB2-229ENST00000411527 AADACL2Q6P093 401 aa13.66□□□□□ -0.22
HLA-DQB2-229ENST00000411527 LINC00696Q6ZRV3 163 aa13.66□□□□□ -0.22
HLA-DQB2-229ENST00000411527 COX15Q7KZN9 410 aa13.66□□□□□ -0.22
HLA-DQB2-229ENST00000411527 TAX1BP1Q86VP1 789 aa13.66□□□□□ -0.22
HLA-DQB2-229ENST00000411527 LINC01555Q8NAE3 123 aa13.66□□□□□ -0.22
HLA-DQB2-229ENST00000411527 CFAP61Q8NHU2 1237 aa13.66□□□□□ -0.22
HLA-DQB2-229ENST00000411527 SLC22A18Q96BI1 424 aa13.66□□□□□ -0.22
HLA-DQB2-229ENST00000411527 VPS50Q96JG6 964 aa13.66□□□□□ -0.22
HLA-DQB2-229ENST00000411527 LUC7LQ9NQ29 371 aaKnown RBP13.66□□□□□ -0.22
HLA-DQB2-229ENST00000411527 CTSFQ9UBX1 484 aa13.66□□□□□ -0.22
HLA-DQB2-229ENST00000411527 CCDC162PA2VCL2 907 aa13.65□□□□□ -0.22
HLA-DQB2-229ENST00000411527 MROH6A6NGR9 719 aa13.65□□□□□ -0.22
HLA-DQB2-229ENST00000411527 ZNF189O75820 626 aaPredicted RBP13.65□□□□□ -0.22
HLA-DQB2-229ENST00000411527 KLHL18O94889 574 aa13.65□□□□□ -0.22
HLA-DQB2-229ENST00000411527 TJP3O95049 919 aa13.65□□□□□ -0.22
HLA-DQB2-229ENST00000411527 CD9P21926 228 aa13.65□□□□□ -0.22
HLA-DQB2-229ENST00000411527 PSMA3P25788 255 aa13.65□□□□□ -0.22
HLA-DQB2-229ENST00000411527 FOXN2P32314 431 aa13.65□□□□□ -0.22
HLA-DQB2-229ENST00000411527 OR1D4P47884 311 aa13.65□□□□□ -0.22
HLA-DQB2-229ENST00000411527 RWDD2BP57060 319 aa13.65□□□□□ -0.22
HLA-DQB2-229ENST00000411527 HSPA14Q0VDF9 509 aa13.65□□□□□ -0.22
HLA-DQB2-229ENST00000411527 Q0VFX4 171 aa13.65□□□□□ -0.22
HLA-DQB2-229ENST00000411527 TBX2Q13207 712 aaPredicted RBP13.65□□□□□ -0.22
HLA-DQB2-229ENST00000411527 GRM7Q14831 915 aa13.65□□□□□ -0.22
HLA-DQB2-229ENST00000411527 SPA17Q15506 151 aa13.65□□□□□ -0.22
HLA-DQB2-229ENST00000411527 SF1Q15637 639 aaKnown RBP13.65□□□□□ -0.22
HLA-DQB2-229ENST00000411527 CCDC38Q502W7 563 aa13.65□□□□□ -0.22
HLA-DQB2-229ENST00000411527 DNAJC21Q5F1R6 531 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms