RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 RNF38Q9H0F5 515 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 SLC32A1Q9H598 525 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 VPS51Q9UID3 782 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 SAMD4AQ9UPU9 718 aaKnown RBP16.29■□□□□ 0.2
LIMS2-208ENST00000410011 C1orf232A0A0U1RR37 186 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 CA12O43570 354 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 SOCS5O75159 536 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 NDUFS2O75306 463 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 GABARAPO95166 117 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 ANXA5P08758 320 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 ALPIP09923 528 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 CTPS1P17812 591 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 AGXTP21549 392 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 S100A3P33764 101 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 CA5AP35218 305 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 BCAP31P51572 246 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 MLLT10P55197 1068 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 GP2P55259 537 aaKnown RBP16.29■□□□□ 0.2
LIMS2-208ENST00000410011 VAC14Q08AM6 782 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 ZNF846Q147U1 533 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 SLC44A4Q53GD3 710 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 GRAMD4Q6IC98 578 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 LRRC8DQ7L1W4 858 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 SERPINA11Q86U17 422 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 PHACTR4Q8IZ21 702 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 FRS2Q8WU20 508 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 TRMT2BQ96GJ1 504 aaKnown RBP16.29■□□□□ 0.2
LIMS2-208ENST00000410011 SH3YL1Q96HL8 342 aaPredicted RBP16.29■□□□□ 0.2
LIMS2-208ENST00000410011 APOL5Q9BWW9 433 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 ACPTQ9BZG2 426 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 DUSP21Q9H596 190 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 PARVBQ9HBI1 364 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 LTB4R2Q9NPC1 389 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 NECTIN3Q9NQS3 549 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 SLC6A13Q9NSD5 602 aa16.29■□□□□ 0.2
LIMS2-208ENST00000410011 WARS2Q9UGM6 360 aaKnown RBP16.29■□□□□ 0.2
LIMS2-208ENST00000410011 EVLQ9UI08 416 aaPredicted RBP16.29■□□□□ 0.2
LIMS2-208ENST00000410011 FCF1Q9Y324 198 aaKnown RBP16.29■□□□□ 0.2
LIMS2-208ENST00000410011 CLDN25C9JDP6 229 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 EFEMP2O95967 443 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 SLC10A3P09131 477 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 PRKAR2AP13861 404 aaKnown RBP16.28■□□□□ 0.2
LIMS2-208ENST00000410011 MAPK1P28482 360 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 BOP1Q14137 746 aaKnown RBP16.28■□□□□ 0.2
LIMS2-208ENST00000410011 SPCS2Q15005 226 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 GTDC1Q4AE62 458 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 PRSS55Q6UWB4 352 aaPredicted RBP16.28■□□□□ 0.2
LIMS2-208ENST00000410011 TCAIMQ8N3R3 496 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 CLDN19Q8N6F1 224 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 ZBTB8BQ8NAP8 495 aaPredicted RBP16.28■□□□□ 0.2
LIMS2-208ENST00000410011 UPF1Q92900 1129 aaKnown RBP eCLIP16.28■□□□□ 0.2
LIMS2-208ENST00000410011 NCLNQ969V3 563 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 ITPKCQ96DU7 683 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 MRPL9Q9BYD2 267 aaKnown RBP16.28■□□□□ 0.2
LIMS2-208ENST00000410011 PAK1IP1Q9NWT1 392 aaPredicted RBP16.28■□□□□ 0.2
LIMS2-208ENST00000410011 GIN1Q9NXP7 522 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 KCTD5Q9NXV2 234 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 ZNF106Q9H2Y7 1883 aaKnown RBP16.28■□□□□ 0.2
LIMS2-208ENST00000410011 PLXNA4Q9HCM2 1894 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 GLYATL1P3A0A0U1RQE8 302 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 BCKDKO14874 412 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 SLC22A1O15245 554 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 ADAM12O43184 909 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 HOXA2O43364 376 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 BPIP17213 487 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 ITGB6P18564 788 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 EPORP19235 508 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 OCA2Q04671 838 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 EMX1Q04741 257 aaPredicted RBP16.28■□□□□ 0.2
LIMS2-208ENST00000410011 PRKCZQ05513 592 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 ABRQ12979 859 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 ATXN7L2Q5T6C5 722 aaPredicted RBP16.28■□□□□ 0.2
LIMS2-208ENST00000410011 CAPN13Q6MZZ7 669 aaPredicted RBP16.28■□□□□ 0.2
LIMS2-208ENST00000410011 LRRC70Q7Z2Q7 622 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 NXPE1Q8N323 547 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 HJURPQ8NCD3 748 aaPredicted RBP16.28■□□□□ 0.2
LIMS2-208ENST00000410011 FAR1Q8WVX9 515 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 S100ZQ8WXG8 99 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 WBP2Q969T9 261 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 CMTM7Q96FZ5 175 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 LYSMD1Q96S90 227 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 WDR12Q9GZL7 423 aaKnown RBP16.28■□□□□ 0.2
LIMS2-208ENST00000410011 IL1RAPQ9NPH3 570 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 AFF4Q9UHB7 1163 aaKnown RBP16.28■□□□□ 0.2
LIMS2-208ENST00000410011 SNX6Q9UNH7 406 aa16.28■□□□□ 0.2
LIMS2-208ENST00000410011 TBL1XO60907 577 aa16.27■□□□□ 0.2
LIMS2-208ENST00000410011 PFKLP17858 780 aa16.27■□□□□ 0.2
LIMS2-208ENST00000410011 PRKACGP22612 351 aa16.27■□□□□ 0.2
LIMS2-208ENST00000410011 SPAM1P38567 509 aa16.27■□□□□ 0.2
LIMS2-208ENST00000410011 NSG1P42857 185 aa16.27■□□□□ 0.2
LIMS2-208ENST00000410011 TRPC1P48995 793 aa16.27■□□□□ 0.2
LIMS2-208ENST00000410011 MAPK10P53779 464 aa16.27■□□□□ 0.2
LIMS2-208ENST00000410011 BCL2L1Q07817 233 aa16.27■□□□□ 0.2
LIMS2-208ENST00000410011 SREBF2Q12772 1141 aa16.27■□□□□ 0.2
LIMS2-208ENST00000410011 ANKRD34AQ69YU3 496 aa16.27■□□□□ 0.2
LIMS2-208ENST00000410011 NEK10Q6ZWH5 1172 aa16.27■□□□□ 0.2
LIMS2-208ENST00000410011 IGFN1Q86VF2 1251 aa16.27■□□□□ 0.2
LIMS2-208ENST00000410011 CRIPAKQ8N1N5 446 aa16.27■□□□□ 0.2
LIMS2-208ENST00000410011 TM9SF3Q9HD45 589 aa16.27■□□□□ 0.2
LIMS2-208ENST00000410011 HMG20AQ9NP66 347 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms