RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 ZC3HC1Q86WB0 502 aaKnown RBP10.55□□□□□ -0.72
CHMP3-205ENST00000409810 PPP1R3BQ86XI6 285 aa10.55□□□□□ -0.72
CHMP3-205ENST00000409810 RELL1Q8IUW5 271 aa10.55□□□□□ -0.72
CHMP3-205ENST00000409810 RASGRP3Q8IV61 690 aa10.55□□□□□ -0.72
CHMP3-205ENST00000409810 CTAGE3PQ8IX95 158 aa10.55□□□□□ -0.72
CHMP3-205ENST00000409810 FBXO15Q8NCQ5 510 aaPredicted RBP10.55□□□□□ -0.72
CHMP3-205ENST00000409810 OR9A1PQ8NGU1 263 aa10.55□□□□□ -0.72
CHMP3-205ENST00000409810 OR8K5Q8NH50 307 aa10.55□□□□□ -0.72
CHMP3-205ENST00000409810 FBF1Q8TES7 1133 aa10.55□□□□□ -0.72
CHMP3-205ENST00000409810 OR6C1Q96RD1 312 aa10.55□□□□□ -0.72
CHMP3-205ENST00000409810 PITPNM3Q9BZ71 974 aa10.55□□□□□ -0.72
CHMP3-205ENST00000409810 L2HGDHQ9H9P8 463 aa10.55□□□□□ -0.72
CHMP3-205ENST00000409810 LRRC4CQ9HCJ2 640 aa10.55□□□□□ -0.72
CHMP3-205ENST00000409810 INTS7Q9NVH2 962 aaKnown RBP10.55□□□□□ -0.72
CHMP3-205ENST00000409810 FOXJ2Q9P0K8 574 aa10.55□□□□□ -0.72
CHMP3-205ENST00000409810 RARRES3Q9UL19 164 aa10.55□□□□□ -0.72
CHMP3-205ENST00000409810 EPG5Q9HCE0 2579 aa10.55□□□□□ -0.72
CHMP3-205ENST00000409810 USP24Q9UPU5 2620 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 SLC9B1P1A6NJY1 282 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 FAM159BA6NKW6 160 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.54□□□□□ -0.72
CHMP3-205ENST00000409810 MYO1CO00159 1063 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 SEC16AO15027 2179 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 SLC16A5O15375 505 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 EBLN1P0CF75 366 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 OAS2P29728 719 aaKnown RBP10.54□□□□□ -0.72
CHMP3-205ENST00000409810 UCNP55089 124 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 CDKN2DP55273 166 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 GPX6P59796 221 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 TUBB4BP68371 445 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 SH3BP2P78314 561 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 POU4F1Q01851 419 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 SLMAPQ14BN4 828 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.54□□□□□ -0.72
CHMP3-205ENST00000409810 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.54□□□□□ -0.72
CHMP3-205ENST00000409810 GRTP1Q5TC63 336 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 PAQR3Q6TCH7 311 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 UBE2R2Q712K3 238 aaPredicted RBP10.54□□□□□ -0.72
CHMP3-205ENST00000409810 TAX1BP1Q86VP1 789 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 PPM1NQ8N819 430 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 C19orf47Q8N9M1 422 aaKnown RBP10.54□□□□□ -0.72
CHMP3-205ENST00000409810 HMGCLL1Q8TB92 370 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 MCOLN3Q8TDD5 553 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 ASB11Q8WXH4 323 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 N4BP2L2Q92802 583 aaPredicted RBP10.54□□□□□ -0.72
CHMP3-205ENST00000409810 LINGO1Q96FE5 620 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 TSPAN17Q96FV3 270 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 NAF1Q96HR8 494 aaKnown RBP10.54□□□□□ -0.72
CHMP3-205ENST00000409810 IL17FQ96PD4 163 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 FCRL4Q96PJ5 515 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 OR2A14Q96R47 310 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 RBBP8Q99708 897 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 CTRCQ99895 268 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 MENTQ9BUN1 341 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 POPDC3Q9HBV1 291 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 SMYD2Q9NRG4 433 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.54□□□□□ -0.72
CHMP3-205ENST00000409810 CIDEBQ9UHD4 219 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 PSAT1Q9Y617 370 aa10.54□□□□□ -0.72
CHMP3-205ENST00000409810 MDC1Q14676 2089 aaKnown RBP10.53□□□□□ -0.72
CHMP3-205ENST00000409810 GFYI3L273 518 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 KLK10O43240 276 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 ZNF500O60304 480 aaPredicted RBP10.53□□□□□ -0.72
CHMP3-205ENST00000409810 CCNDBP1O95273 360 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 SYF2O95926 243 aaKnown RBP10.53□□□□□ -0.72
CHMP3-205ENST00000409810 MT-ND3P03897 115 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 HIST1H2AGP0C0S8 130 aaPredicted RBP10.53□□□□□ -0.72
CHMP3-205ENST00000409810 RHOXF2BP0C7M4 288 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 MSL3P1P0C860 447 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 TPBGLP0DKB5 382 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 ERGP11308 486 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 FGF5P12034 268 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 FOLR1P15328 257 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 ST6GAL1P15907 406 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 ZNF37AP17032 561 aaPredicted RBP10.53□□□□□ -0.72
CHMP3-205ENST00000409810 HIST1H2ADP20671 130 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 SAT1P21673 171 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 PEBP1P30086 187 aaKnown RBP10.53□□□□□ -0.72
CHMP3-205ENST00000409810 SPRP35270 261 aaPredicted RBP10.53□□□□□ -0.72
CHMP3-205ENST00000409810 TIAL1Q01085 375 aaKnown RBP eCLIP10.53□□□□□ -0.72
CHMP3-205ENST00000409810 GRB7Q14451 532 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 CYP2A13Q16696 494 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 KBTBD12Q3ZCT8 623 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 FBXO38Q6PIJ6 1188 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 CYHR1Q6ZMK1 362 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 SPACA3Q8IXA5 215 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 NKAPQ8N5F7 415 aaKnown RBP10.53□□□□□ -0.72
CHMP3-205ENST00000409810 LINC01555Q8NAE3 123 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 EEF1AKMT1Q8WVE0 214 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 PMEPA1Q969W9 287 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 TCTN2Q96GX1 697 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 HIST1H2AHQ96KK5 128 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 PPM1MQ96MI6 270 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 TRAPPC9Q96Q05 1148 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 PKP4Q99569 1192 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 NRTNQ99748 197 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 OLFM1Q99784 485 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 HIST1H2AJQ99878 128 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 RHOXF2Q9BQY4 288 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 H2AFJQ9BTM1 129 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms