RNA–Protein interactions for RNA: ENST00000409704.6

ITM2C-204, Transcript of integral membrane protein 2C, humanhuman

TSL 5 BASIC

Gene ITM2C, Length 1,106 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-204ENST00000409704 SYVN1Q86TM6 617 aa17.28■□□□□ 0.36
ITM2C-204ENST00000409704 FAM20CQ8IXL6 584 aa17.28■□□□□ 0.36
ITM2C-204ENST00000409704 SEC14L1Q92503 715 aa17.28■□□□□ 0.36
ITM2C-204ENST00000409704 ANP32BQ92688 251 aaKnown RBP17.28■□□□□ 0.36
ITM2C-204ENST00000409704 N4BP2L2Q92802 583 aaPredicted RBP17.28■□□□□ 0.36
ITM2C-204ENST00000409704 SLCO2A1Q92959 643 aa17.28■□□□□ 0.36
ITM2C-204ENST00000409704 FAM136AQ96C01 138 aa17.28■□□□□ 0.36
ITM2C-204ENST00000409704 FAM117AQ9C073 453 aa17.28■□□□□ 0.36
ITM2C-204ENST00000409704 ASIC3Q9UHC3 531 aa17.28■□□□□ 0.36
ITM2C-204ENST00000409704 TSR3Q9UJK0 312 aaKnown RBP17.28■□□□□ 0.36
ITM2C-204ENST00000409704 VPS9D1Q9Y2B5 631 aa17.28■□□□□ 0.36
ITM2C-204ENST00000409704 MRFAP1Q9Y605 127 aa17.28■□□□□ 0.36
ITM2C-204ENST00000409704 HELZ2Q9BYK8 2649 aaKnown RBP17.27■□□□□ 0.36
ITM2C-204ENST00000409704 KRT87PA6NCN2 255 aa17.27■□□□□ 0.36
ITM2C-204ENST00000409704 DNALI1O14645 258 aaPredicted RBP17.27■□□□□ 0.36
ITM2C-204ENST00000409704 ZNF749O43361 778 aa17.27■□□□□ 0.36
ITM2C-204ENST00000409704 SLC28A2O43868 658 aa17.27■□□□□ 0.36
ITM2C-204ENST00000409704 F7P08709 466 aaPredicted RBP17.27■□□□□ 0.36
ITM2C-204ENST00000409704 PKMP14618 531 aaKnown RBP17.27■□□□□ 0.36
ITM2C-204ENST00000409704 SLC1A2P43004 574 aa17.27■□□□□ 0.36
ITM2C-204ENST00000409704 UGT8Q16880 541 aa17.27■□□□□ 0.36
ITM2C-204ENST00000409704 PTCHD3Q3KNS1 767 aa17.27■□□□□ 0.36
ITM2C-204ENST00000409704 CCSMST1Q4G0I0 132 aa17.27■□□□□ 0.36
ITM2C-204ENST00000409704 ZNF385CQ66K41 422 aaPredicted RBP17.27■□□□□ 0.36
ITM2C-204ENST00000409704 TTC23LQ6PF05 361 aa17.27■□□□□ 0.36
ITM2C-204ENST00000409704 PRICKLE2Q7Z3G6 844 aa17.27■□□□□ 0.36
ITM2C-204ENST00000409704 DENND6AQ8IWF6 608 aa17.27■□□□□ 0.36
ITM2C-204ENST00000409704 GPR135Q8IZ08 494 aa17.27■□□□□ 0.36
ITM2C-204ENST00000409704 C2orf73Q8N5S3 287 aaPredicted RBP17.27■□□□□ 0.36
ITM2C-204ENST00000409704 C9orf43Q8TAL5 461 aaPredicted RBP17.27■□□□□ 0.36
ITM2C-204ENST00000409704 RAD51AP1Q96B01 352 aa17.27■□□□□ 0.36
ITM2C-204ENST00000409704 SLC22A18Q96BI1 424 aa17.27■□□□□ 0.36
ITM2C-204ENST00000409704 SIGLEC10Q96LC7 697 aa17.27■□□□□ 0.36
ITM2C-204ENST00000409704 SLC7A5P2Q9GIP4 190 aa17.27■□□□□ 0.36
ITM2C-204ENST00000409704 FBXO6Q9NRD1 293 aaPredicted RBP17.27■□□□□ 0.36
ITM2C-204ENST00000409704 SLC39A10Q9ULF5 831 aa17.27■□□□□ 0.36
ITM2C-204ENST00000409704 PYCARDQ9ULZ3 195 aa17.27■□□□□ 0.36
ITM2C-204ENST00000409704 FARSAQ9Y285 508 aaKnown RBP17.27■□□□□ 0.36
ITM2C-204ENST00000409704 MAN2B2Q9Y2E5 1009 aa17.27■□□□□ 0.36
ITM2C-204ENST00000409704 MAD1L1Q9Y6D9 718 aa17.27■□□□□ 0.36
ITM2C-204ENST00000409704 E5RI56 91 aa17.26■□□□□ 0.35
ITM2C-204ENST00000409704 J3QKU1 62 aa17.26■□□□□ 0.35
ITM2C-204ENST00000409704 ZSCAN9O15535 394 aaPredicted RBP17.26■□□□□ 0.35
ITM2C-204ENST00000409704 OR2B3O76000 313 aa17.26■□□□□ 0.35
ITM2C-204ENST00000409704 CTSBP07858 339 aa17.26■□□□□ 0.35
ITM2C-204ENST00000409704 RAB40ALP0C0E4 278 aa17.26■□□□□ 0.35
ITM2C-204ENST00000409704 CCNFP41002 786 aa17.26■□□□□ 0.35
ITM2C-204ENST00000409704 PMS2P54278 862 aa17.26■□□□□ 0.35
ITM2C-204ENST00000409704 THOC5Q13769 683 aaKnown RBP17.26■□□□□ 0.35
ITM2C-204ENST00000409704 LONRF1Q17RB8 773 aa17.26■□□□□ 0.35
ITM2C-204ENST00000409704 DNAJC22Q8N4W6 341 aa17.26■□□□□ 0.35
ITM2C-204ENST00000409704 ZBTB2Q8N680 514 aa17.26■□□□□ 0.35
ITM2C-204ENST00000409704 ENDOVQ8N8Q3 282 aaKnown RBP17.26■□□□□ 0.35
ITM2C-204ENST00000409704 DENND1AQ8TEH3 1009 aa17.26■□□□□ 0.35
ITM2C-204ENST00000409704 CAPZA3Q96KX2 299 aa17.26■□□□□ 0.35
ITM2C-204ENST00000409704 FOPNLQ96NB1 174 aa17.26■□□□□ 0.35
ITM2C-204ENST00000409704 SPATA7Q9P0W8 599 aa17.26■□□□□ 0.35
ITM2C-204ENST00000409704 GALPQ9UBC7 116 aa17.26■□□□□ 0.35
ITM2C-204ENST00000409704 PCYOX1Q9UHG3 505 aa17.26■□□□□ 0.35
ITM2C-204ENST00000409704 KLHL20Q9Y2M5 609 aa17.26■□□□□ 0.35
ITM2C-204ENST00000409704 CTAGE9A4FU28 777 aa17.25■□□□□ 0.35
ITM2C-204ENST00000409704 PRICKLE3O43900 615 aaPredicted RBP17.25■□□□□ 0.35
ITM2C-204ENST00000409704 MATN4O95460 622 aa17.25■□□□□ 0.35
ITM2C-204ENST00000409704 CAPN1P07384 714 aa17.25■□□□□ 0.35
ITM2C-204ENST00000409704 HBQ1P09105 142 aa17.25■□□□□ 0.35
ITM2C-204ENST00000409704 CHRM3P20309 590 aa17.25■□□□□ 0.35
ITM2C-204ENST00000409704 PSMB5P28074 263 aa17.25■□□□□ 0.35
ITM2C-204ENST00000409704 PTGIRP43119 386 aa17.25■□□□□ 0.35
ITM2C-204ENST00000409704 CLCN7P51798 805 aa17.25■□□□□ 0.35
ITM2C-204ENST00000409704 GNG11P61952 73 aa17.25■□□□□ 0.35
ITM2C-204ENST00000409704 CTBP1Q13363 440 aa17.25■□□□□ 0.35
ITM2C-204ENST00000409704 CRYMQ14894 314 aa17.25■□□□□ 0.35
ITM2C-204ENST00000409704 ACSBG2Q5FVE4 666 aa17.25■□□□□ 0.35
ITM2C-204ENST00000409704 PAPD7Q5XG87 772 aaKnown RBP17.25■□□□□ 0.35
ITM2C-204ENST00000409704 LMNTD2Q8IXW0 634 aa17.25■□□□□ 0.35
ITM2C-204ENST00000409704 RAB42Q8N4Z0 105 aa17.25■□□□□ 0.35
ITM2C-204ENST00000409704 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.25■□□□□ 0.35
ITM2C-204ENST00000409704 GIMAP7Q8NHV1 300 aa17.25■□□□□ 0.35
ITM2C-204ENST00000409704 HMGCLL1Q8TB92 370 aa17.25■□□□□ 0.35
ITM2C-204ENST00000409704 SLC30A3Q99726 388 aa17.25■□□□□ 0.35
ITM2C-204ENST00000409704 DPH2Q9BQC3 489 aaPredicted RBP17.25■□□□□ 0.35
ITM2C-204ENST00000409704 FAM167BQ9BTA0 163 aa17.25■□□□□ 0.35
ITM2C-204ENST00000409704 NLNQ9BYT8 704 aa17.25■□□□□ 0.35
ITM2C-204ENST00000409704 C20orf96Q9NUD7 363 aaPredicted RBP17.25■□□□□ 0.35
ITM2C-204ENST00000409704 INTS7Q9NVH2 962 aaKnown RBP17.25■□□□□ 0.35
ITM2C-204ENST00000409704 SNX7Q9UNH6 387 aa17.25■□□□□ 0.35
ITM2C-204ENST00000409704 PLCL2Q9UPR0 1127 aa17.25■□□□□ 0.35
ITM2C-204ENST00000409704 MED16Q9Y2X0 877 aa17.25■□□□□ 0.35
ITM2C-204ENST00000409704 AP1M2Q9Y6Q5 423 aa17.25■□□□□ 0.35
ITM2C-204ENST00000409704 SPENQ96T58 3664 aaKnown RBP17.25■□□□□ 0.35
ITM2C-204ENST00000409704 SPTA1P02549 2419 aa17.24■□□□□ 0.35
ITM2C-204ENST00000409704 ARHGEF33A8MVX0 844 aa17.24■□□□□ 0.35
ITM2C-204ENST00000409704 RFPL1O75677 317 aa17.24■□□□□ 0.35
ITM2C-204ENST00000409704 ERGP11308 486 aa17.24■□□□□ 0.35
ITM2C-204ENST00000409704 PGAM1P18669 254 aa17.24■□□□□ 0.35
ITM2C-204ENST00000409704 MPP1Q00013 466 aa17.24■□□□□ 0.35
ITM2C-204ENST00000409704 DHX9Q08211 1270 aaKnown RBP17.24■□□□□ 0.35
ITM2C-204ENST00000409704 NCF4Q15080 339 aa17.24■□□□□ 0.35
ITM2C-204ENST00000409704 KLHL38Q2WGJ6 581 aa17.24■□□□□ 0.35
ITM2C-204ENST00000409704 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms