RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 MATN1P21941 496 aa13.08□□□□□ -0.32
COL6A2-204ENST00000409416 TAF1AQ15573 450 aaPredicted RBP13.08□□□□□ -0.32
COL6A2-204ENST00000409416 ARSIQ5FYB1 569 aa13.08□□□□□ -0.32
COL6A2-204ENST00000409416 CCNYL2Q5T2Q4 361 aa13.08□□□□□ -0.32
COL6A2-204ENST00000409416 C8orf82Q6P1X6 216 aaPredicted RBP13.08□□□□□ -0.32
COL6A2-204ENST00000409416 EFL1Q7Z2Z2 1120 aaKnown RBP13.08□□□□□ -0.32
COL6A2-204ENST00000409416 R3HCC1LQ7Z5L2 792 aaKnown RBP13.08□□□□□ -0.32
COL6A2-204ENST00000409416 KLHDC8BQ8IXV7 354 aa13.08□□□□□ -0.32
COL6A2-204ENST00000409416 C8orf59Q8N0T1 100 aaPredicted RBP13.08□□□□□ -0.32
COL6A2-204ENST00000409416 PACRGLQ8N7B6 248 aa13.08□□□□□ -0.32
COL6A2-204ENST00000409416 PXYLP1Q8TE99 480 aa13.08□□□□□ -0.32
COL6A2-204ENST00000409416 IL26Q9NPH9 171 aa13.08□□□□□ -0.32
COL6A2-204ENST00000409416 NLE1Q9NVX2 485 aaPredicted RBP13.08□□□□□ -0.32
COL6A2-204ENST00000409416 PRLP01236 227 aa13.08□□□□□ -0.32
COL6A2-204ENST00000409416 RPS17P08708 135 aaKnown RBP13.08□□□□□ -0.32
COL6A2-204ENST00000409416 ALPPL2P10696 532 aa13.08□□□□□ -0.32
COL6A2-204ENST00000409416 BDKRB1P46663 353 aa13.08□□□□□ -0.32
COL6A2-204ENST00000409416 MASP1P48740 699 aa13.08□□□□□ -0.32
COL6A2-204ENST00000409416 CTSL3PQ5NE16 218 aa13.08□□□□□ -0.32
COL6A2-204ENST00000409416 CACHD1Q5VU97 1274 aa13.08□□□□□ -0.32
COL6A2-204ENST00000409416 ZNF554Q86TJ5 538 aa13.08□□□□□ -0.32
COL6A2-204ENST00000409416 SYT12Q8IV01 421 aa13.08□□□□□ -0.32
COL6A2-204ENST00000409416 FAM20CQ8IXL6 584 aa13.08□□□□□ -0.32
COL6A2-204ENST00000409416 ATG16L2Q8NAA4 619 aa13.08□□□□□ -0.32
COL6A2-204ENST00000409416 CD200R1Q8TD46 325 aa13.08□□□□□ -0.32
COL6A2-204ENST00000409416 VAPAQ9P0L0 249 aa13.08□□□□□ -0.32
COL6A2-204ENST00000409416 WASH4PA8MWX3 477 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 TPST2O60704 377 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 EEDO75530 441 aaKnown RBP13.07□□□□□ -0.32
COL6A2-204ENST00000409416 PRKD3O94806 890 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 ALDH1A1P00352 501 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 HOXB8P17481 243 aaPredicted RBP13.07□□□□□ -0.32
COL6A2-204ENST00000409416 S100A3P33764 101 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 CTNNB1P35222 781 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 PTCHD3Q3KNS1 767 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 Q6ZSR9 355 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 TEX26Q8N6G2 289 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 GPR26Q8NDV2 337 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 JPH3Q8WXH2 748 aaPredicted RBP13.07□□□□□ -0.32
COL6A2-204ENST00000409416 TCF25Q9BQ70 676 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 ATP13A3Q9H7F0 1226 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 MED16Q9Y2X0 877 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 VIPR2P41587 438 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 ZNF140P52738 457 aaPredicted RBP13.07□□□□□ -0.32
COL6A2-204ENST00000409416 PRKAG1P54619 331 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 TEAD2Q15562 447 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 LY6G5CQ5SRR4 150 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 BROXQ5VW32 411 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 ZNF683Q8IZ20 524 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 PANX1Q96RD7 426 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 B4GALT6Q9UBX8 382 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 SH3GLB1Q9Y371 365 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 INSL5Q9Y5Q6 135 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 SPTBN2O15020 2390 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 M0R129 80 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 NME6O75414 186 aaPredicted RBP13.07□□□□□ -0.32
COL6A2-204ENST00000409416 STK16O75716 305 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 VNN2O95498 520 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 BPIP17213 487 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 MSH3P20585 1137 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 AGXTP21549 392 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 TACR1P25103 407 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 MAT2AP31153 395 aaKnown RBP13.07□□□□□ -0.32
COL6A2-204ENST00000409416 MAPKAPK2P49137 400 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 TMED10P49755 219 aaKnown RBP13.07□□□□□ -0.32
COL6A2-204ENST00000409416 EEFSECP57772 596 aaKnown RBP13.07□□□□□ -0.32
COL6A2-204ENST00000409416 CHIT1Q13231 466 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 DAG1Q14118 895 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 KRT33BQ14525 404 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 SETMARQ53H47 684 aaPredicted RBP13.07□□□□□ -0.32
COL6A2-204ENST00000409416 DGKKQ5KSL6 1271 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 NCCRP1Q6ZVX7 275 aaPredicted RBP13.07□□□□□ -0.32
COL6A2-204ENST00000409416 BEND5Q7L4P6 421 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 TMPRSS11BQ86T26 416 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 FAM124AQ86V42 546 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 SNX29P2Q8IUI4 249 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 ZBTB2Q8N680 514 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 C7orf57Q8NEG2 295 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 UTP15Q8TED0 518 aaKnown RBP13.07□□□□□ -0.32
COL6A2-204ENST00000409416 SLC47A1Q96FL8 570 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 IL17FQ96PD4 163 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 TMEM121BQ9BXQ6 578 aaPredicted RBP13.07□□□□□ -0.32
COL6A2-204ENST00000409416 SELENONQ9NZV5 590 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 MAGEL2Q9UJ55 1249 aa13.07□□□□□ -0.32
COL6A2-204ENST00000409416 SCN2AQ99250 2005 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 E2F3O00716 465 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 KDELR3O43731 214 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 PCDH8O95206 1070 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 CAPNS1P04632 268 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 COX7A2P14406 83 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 IDH2P48735 452 aaKnown RBP13.06□□□□□ -0.32
COL6A2-204ENST00000409416 FPGSQ05932 587 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 PIWIL3Q7Z3Z3 882 aaKnown RBP13.06□□□□□ -0.32
COL6A2-204ENST00000409416 GRASPQ7Z6J2 395 aaPredicted RBP13.06□□□□□ -0.32
COL6A2-204ENST00000409416 PROSER1Q86XN7 944 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 ZBTB8BQ8NAP8 495 aaPredicted RBP13.06□□□□□ -0.32
COL6A2-204ENST00000409416 HJURPQ8NCD3 748 aaPredicted RBP13.06□□□□□ -0.32
COL6A2-204ENST00000409416 STON2Q8WXE9 905 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 EID2BQ96D98 161 aa13.06□□□□□ -0.32
COL6A2-204ENST00000409416 BIRC8Q96P09 236 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms