RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 DSC3Q14574 896 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 PAFAH1B3Q15102 231 aaKnown RBP10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 KIF19Q2TAC6 998 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 ZNF699Q32M78 642 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 PROX2Q3B8N5 592 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 ARMCX4Q5H9R4 360 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 KDM4DQ6B0I6 523 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 C19orf48Q6RUI8 117 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 LCLAT1Q6UWP7 414 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 EFL1Q7Z2Z2 1120 aaKnown RBP10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 AMIGO1Q86WK6 493 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 LINC00469Q8N7U9 141 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 ACVR1CQ8NER5 493 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 OR8J3Q8NGG0 315 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 TMEM143Q96AN5 459 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 P2RY11Q96G91 374 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 ZC3HAV1LQ96H79 300 aaKnown RBP10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 COL25A1Q9BXS0 654 aaPredicted RBP10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 BRINP2Q9C0B6 783 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 C6orf62Q9GZU0 229 aaPredicted RBP10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 PPA2Q9H2U2 334 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 RANGRFQ9HD47 186 aaPredicted RBP10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 DYRK4Q9NR20 520 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 IGSF5Q9NSI5 407 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 ZIM2Q9NZV7 527 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 GLS2Q9UI32 602 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 TMEFF2Q9UIK5 374 aaPredicted RBP10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 TRHDEQ9UKU6 1024 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 ELF5Q9UKW6 265 aaPredicted RBP10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 TMPRSS11EQ9UL52 423 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 BTRCQ9Y297 605 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 MRPL42Q9Y6G3 142 aaKnown RBP10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 A0A087WZ62 844 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 E2F8A0AVK6 867 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 WASH4PA8MWX3 477 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 ACKR2O00590 384 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 STX16O14662 325 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 PLD2O14939 933 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 ZNF623O75123 536 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 USP12O75317 370 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 SERPINI2O75830 405 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 OR2B3O76000 313 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 PDE9AO76083 593 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 CYP2A6P11509 494 aaPredicted RBP10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 NCF1P14598 390 aaPredicted RBP10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 HNRNPLP14866 589 aaKnown RBP eCLIP10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 DARSP14868 501 aaKnown RBP10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 PSMB4P28070 264 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 ALDH4A1P30038 563 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 HLA-FP30511 346 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 UQCRC1P31930 480 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 DCTP40126 519 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 MAP2K4P45985 399 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 SCNN1GP51170 649 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 MAP3K7CLP57077 242 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 KCNK10P57789 538 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 SCN1BQ07699 218 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 ELP6Q0PNE2 266 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 TRIP4Q15650 581 aaPredicted RBP10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 TIMM50Q3ZCQ8 353 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 INTS6LQ5JSJ4 861 aaKnown RBP10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 SH3PXD2AQ5TCZ1 1133 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 PRSS42Q7Z5A4 293 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 RNF130Q86XS8 419 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 NPAS4Q8IUM7 802 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 TMEM192Q8IY95 271 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 PM20D2Q8IYS1 436 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 ZNF567Q8N184 647 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 OR4M1Q8NGD0 313 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 CIDECQ96AQ7 238 aaPredicted RBP10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 KIAA1143Q96AT1 154 aaPredicted RBP10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 MOCOSQ96EN8 888 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 TMEM176AQ96HP8 235 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 HYLS1Q96M11 299 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 DMRTB1Q96MA1 342 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 DCBLD2Q96PD2 775 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 VAT1Q99536 393 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 SEPHS2Q99611 448 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 PITX2Q99697 317 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 FDXACB1Q9BRP7 624 aaPredicted RBP10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 ZSCAN5AQ9BUG6 496 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 FAM83DQ9H4H8 585 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 IFT22Q9H7X7 185 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 SCPEP1Q9HB40 452 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 RGS18Q9NS28 235 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 TAS2R7Q9NYW3 318 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 MAT2BQ9NZL9 334 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 ATP6V1HQ9UI12 483 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 PCDHB14Q9Y5E9 798 aa10.39□□□□□ -0.75
NIF3L1-204ENST00000409357 A0A1B0GVM2 712 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 FAM234BA2RU67 622 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 ATP6V1G2-DDX39BF2Z307 99 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 K7ERI5 159 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 DLL1O00548 723 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 MUSKO15146 869 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 GPR182O15218 404 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 NCAM2O15394 837 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 PROM1O43490 865 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 CPNE3O75131 537 aaKnown RBP10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 CILPO75339 1184 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms