RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 H0YAE9 185 aa13.08□□□□□ -0.31
SNED1-205ENST00000405547 PHC1P78364 1004 aa13.08□□□□□ -0.31
SNED1-205ENST00000405547 HSPB3Q12988 150 aa13.08□□□□□ -0.31
SNED1-205ENST00000405547 TPRG1LQ5T0D9 272 aa13.08□□□□□ -0.31
SNED1-205ENST00000405547 SMURF2Q9HAU4 748 aa13.08□□□□□ -0.31
SNED1-205ENST00000405547 SPATA7Q9P0W8 599 aa13.08□□□□□ -0.31
SNED1-205ENST00000405547 IKZF2Q9UKS7 526 aa13.08□□□□□ -0.31
SNED1-205ENST00000405547 CFHP08603 1231 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 NRLP54845 237 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 TMBIM6P55061 237 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 VARS2Q5ST30 1063 aaKnown RBP13.08□□□□□ -0.32
SNED1-205ENST00000405547 SIGLEC10Q96LC7 697 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 CFAP97Q9P2B7 532 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 CARD8Q9Y2G2 431 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 OR2AG2A6NM03 316 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 SIX3O95343 332 aaPredicted RBP13.08□□□□□ -0.32
SNED1-205ENST00000405547 SLC2A2P11168 524 aaPredicted RBP13.08□□□□□ -0.32
SNED1-205ENST00000405547 SLC9A6Q92581 669 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 SLC32A1Q9H598 525 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 SIRPB2Q5JXA9 342 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 SAMD14Q8IZD0 417 aaPredicted RBP13.08□□□□□ -0.32
SNED1-205ENST00000405547 OR10H4Q8NGA5 316 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 ADAM7Q9H2U9 754 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 IFNA7P01567 189 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 ACSL1P33121 698 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 CHRNA4P43681 627 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 SWI5Q1ZZU3 235 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 EIPR1Q53HC9 387 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 CMPK2Q5EBM0 449 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 KLHL35Q6PF15 583 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 PCDHGB7Q9Y5F8 929 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 NR2E3Q9Y5X4 410 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 STBD1O95210 358 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 EOMESO95936 686 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 IL7RP16871 459 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 IST1P53990 364 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 CBLBQ13191 982 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 BORCS6Q96GS4 357 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 PRICKLE1Q96MT3 831 aaPredicted RBP13.08□□□□□ -0.32
SNED1-205ENST00000405547 MAP10Q9P2G4 905 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 PCDHGB1Q9Y5G3 927 aa13.08□□□□□ -0.32
SNED1-205ENST00000405547 PRORSD1PA6NEY8 169 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 TMEM233B4DJY2 109 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 E7ESA3 106 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 CD72P21854 359 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 ACADLP28330 430 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 CSTF2P33240 577 aaKnown RBP eCLIP13.07□□□□□ -0.32
SNED1-205ENST00000405547 KHKP50053 298 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 PCDH1Q08174 1060 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 RUNDC3AQ59EK9 446 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 CRB2Q5IJ48 1285 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 STX12Q86Y82 276 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 CILP2Q8IUL8 1156 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 TRPM4Q8TD43 1214 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 EFHD2Q96C19 240 aaPredicted RBP13.07□□□□□ -0.32
SNED1-205ENST00000405547 CCDC106Q9BWC9 280 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 COMMD3Q9UBI1 195 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 PRNPP04156 253 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 SLC10A7Q0GE19 358 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 SYPL2Q5VXT5 272 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 FAM91A1Q658Y4 838 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 PDE12Q6L8Q7 609 aaKnown RBP13.07□□□□□ -0.32
SNED1-205ENST00000405547 DRAXINQ8NBI3 349 aaPredicted RBP13.07□□□□□ -0.32
SNED1-205ENST00000405547 MID1O15344 667 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 PDPK1O15530 556 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 AKAP8O43823 692 aaKnown RBP13.07□□□□□ -0.32
SNED1-205ENST00000405547 NIPSNAP2O75323 286 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 RFPL1O75677 317 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 CBSLP0DN79 551 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 CBSP35520 551 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 CSTF1Q05048 431 aaKnown RBP13.07□□□□□ -0.32
SNED1-205ENST00000405547 C15orf40Q8WUR7 153 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 SLC30A2Q9BRI3 323 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 RSPH9Q9H1X1 276 aaPredicted RBP13.07□□□□□ -0.32
SNED1-205ENST00000405547 ADAMTS10Q9H324 1103 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 SLC35C2Q9NQQ7 365 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.07□□□□□ -0.32
SNED1-205ENST00000405547 MKS1Q9NXB0 559 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 H0YJX3 145 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 FANCGO15287 622 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 HTRA2O43464 458 aaPredicted RBP13.07□□□□□ -0.32
SNED1-205ENST00000405547 SYT16Q17RD7 645 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 CIR1Q86X95 450 aaPredicted RBP13.07□□□□□ -0.32
SNED1-205ENST00000405547 KIAA1191Q96A73 305 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 DMRTB1Q96MA1 342 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 DERL2Q9GZP9 239 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 COMMD4Q9H0A8 199 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 TOP3BO95985 862 aaKnown RBP13.07□□□□□ -0.32
SNED1-205ENST00000405547 AP1S2P56377 157 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 DSC3Q14574 896 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 ZNF404Q494X3 552 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 PAMR1Q6UXH9 720 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 PTF1AQ7RTS3 328 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 SLC22A16Q86VW1 577 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 SLC45A3Q96JT2 553 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 ART5Q96L15 291 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 FER1L6Q2WGJ9 1857 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 ZNF541Q9H0D2 1346 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 PDCD5O14737 125 aa13.07□□□□□ -0.32
SNED1-205ENST00000405547 INCA1Q0VD86 236 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms