RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 C1orf50Q9BV19 199 aa24.9■■□□□ 1.58
CPNE1-205ENST00000401607 DENND2DQ9H6A0 471 aaPredicted RBP24.9■■□□□ 1.58
CPNE1-205ENST00000401607 RMI1Q9H9A7 625 aa24.9■■□□□ 1.58
CPNE1-205ENST00000401607 PSMD13Q9UNM6 376 aa24.9■■□□□ 1.58
CPNE1-205ENST00000401607 KLHL33A6NCF5 533 aa24.89■■□□□ 1.57
CPNE1-205ENST00000401607 POM121BA6NF01 834 aa24.89■■□□□ 1.57
CPNE1-205ENST00000401607 C10orf142B7Z368 130 aa24.89■■□□□ 1.57
CPNE1-205ENST00000401607 ATP6V1G2O95670 118 aa24.89■■□□□ 1.57
CPNE1-205ENST00000401607 SNRPB2P08579 225 aaKnown RBP24.89■■□□□ 1.57
CPNE1-205ENST00000401607 ACP5P13686 325 aa24.89■■□□□ 1.57
CPNE1-205ENST00000401607 CLDN2P57739 230 aa24.89■■□□□ 1.57
CPNE1-205ENST00000401607 CHIT1Q13231 466 aa24.89■■□□□ 1.57
CPNE1-205ENST00000401607 CHST15Q7LFX5 561 aaPredicted RBP24.89■■□□□ 1.57
CPNE1-205ENST00000401607 SCUBE1Q8IWY4 988 aa24.89■■□□□ 1.57
CPNE1-205ENST00000401607 DEFB107AQ8IZN7 70 aa24.89■■□□□ 1.57
CPNE1-205ENST00000401607 FNDC5Q8NAU1 212 aa24.89■■□□□ 1.57
CPNE1-205ENST00000401607 KYQ8NBH2 561 aa24.89■■□□□ 1.57
CPNE1-205ENST00000401607 NPAS2Q99743 824 aa24.89■■□□□ 1.57
CPNE1-205ENST00000401607 BRINP2Q9C0B6 783 aa24.89■■□□□ 1.57
CPNE1-205ENST00000401607 MRPL40Q9NQ50 206 aaKnown RBP24.89■■□□□ 1.57
CPNE1-205ENST00000401607 ASF1AQ9Y294 204 aa24.89■■□□□ 1.57
CPNE1-205ENST00000401607 CACNB4O00305 520 aaPredicted RBP24.88■■□□□ 1.57
CPNE1-205ENST00000401607 SLC28A1O00337 649 aa24.88■■□□□ 1.57
CPNE1-205ENST00000401607 FBP2O00757 339 aa24.88■■□□□ 1.57
CPNE1-205ENST00000401607 WFS1O76024 890 aa24.88■■□□□ 1.57
CPNE1-205ENST00000401607 KRT6AP02538 564 aa24.88■■□□□ 1.57
CPNE1-205ENST00000401607 KRT6BP04259 564 aa24.88■■□□□ 1.57
CPNE1-205ENST00000401607 KRT6CP48668 564 aa24.88■■□□□ 1.57
CPNE1-205ENST00000401607 SGO1Q5FBB7 561 aa24.88■■□□□ 1.57
CPNE1-205ENST00000401607 HOMEZQ8IX15 550 aa24.88■■□□□ 1.57
CPNE1-205ENST00000401607 DSELQ8IZU8 1212 aa24.88■■□□□ 1.57
CPNE1-205ENST00000401607 OR5AR1Q8NGP9 310 aa24.88■■□□□ 1.57
CPNE1-205ENST00000401607 TFGQ92734 400 aaPredicted RBP24.88■■□□□ 1.57
CPNE1-205ENST00000401607 TIMM29Q9BSF4 260 aa24.88■■□□□ 1.57
CPNE1-205ENST00000401607 EFCAB1Q9HAE3 211 aa24.88■■□□□ 1.57
CPNE1-205ENST00000401607 SGK2Q9HBY8 427 aa24.88■■□□□ 1.57
CPNE1-205ENST00000401607 POLMQ9NP87 494 aaPredicted RBP24.88■■□□□ 1.57
CPNE1-205ENST00000401607 C2orf42Q9NWW7 574 aa24.88■■□□□ 1.57
CPNE1-205ENST00000401607 LRRC72A6NJI9 287 aa24.88■■□□□ 1.57
CPNE1-205ENST00000401607 E7EQ34 232 aa24.88■■□□□ 1.57
CPNE1-205ENST00000401607 CD22P20273 847 aa24.88■■□□□ 1.57
CPNE1-205ENST00000401607 HALP42357 657 aa24.88■■□□□ 1.57
CPNE1-205ENST00000401607 ZRSR2Q15696 482 aaKnown RBP24.88■■□□□ 1.57
CPNE1-205ENST00000401607 AP5B1Q2VPB7 878 aa24.88■■□□□ 1.57
CPNE1-205ENST00000401607 PYCR3Q53H96 274 aa24.88■■□□□ 1.57
CPNE1-205ENST00000401607 LRRC56Q8IYG6 542 aaPredicted RBP24.88■■□□□ 1.57
CPNE1-205ENST00000401607 PHC3Q8NDX5 983 aa24.88■■□□□ 1.57
CPNE1-205ENST00000401607 SLC45A3Q96JT2 553 aa24.88■■□□□ 1.57
CPNE1-205ENST00000401607 SUFUQ9UMX1 484 aa24.88■■□□□ 1.57
CPNE1-205ENST00000401607 CA5BQ9Y2D0 317 aa24.88■■□□□ 1.57
CPNE1-205ENST00000401607 CHURC1-FNTBB4DL54 471 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 RGS14O43566 566 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 UGDHO60701 494 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 PDYNP01213 254 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 HOXC4P09017 264 aaPredicted RBP24.87■■□□□ 1.57
CPNE1-205ENST00000401607 JUPP14923 745 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 DGKEP52429 567 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 KIAA1024LP59773 190 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 TBPL1P62380 186 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 HMGCS1Q01581 520 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 IRF8Q02556 426 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 EMX2Q04743 252 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 PCDH1Q08174 1060 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 GRIK2Q13002 908 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 STX5Q13190 355 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 REP15Q6BDI9 236 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 SYT13Q7L8C5 426 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 PACS2Q86VP3 889 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 SYTL1Q8IYJ3 562 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 RGL4Q8IZJ4 473 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 LMNTD1Q8N9Z9 388 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 MAGEC3Q8TD91 643 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 SCARF2Q96GP6 870 aaPredicted RBP24.87■■□□□ 1.57
CPNE1-205ENST00000401607 MAGEB10Q96LZ2 347 aaPredicted RBP24.87■■□□□ 1.57
CPNE1-205ENST00000401607 PPP3R2Q96LZ3 170 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 SLC25A23Q9BV35 468 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 LMAN1LQ9HAT1 526 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 FGF22Q9HCT0 170 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 SLC7A8Q9UHI5 535 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 PLEKHM1Q9Y4G2 1056 aa24.87■■□□□ 1.57
CPNE1-205ENST00000401607 PRR19A6NJB7 356 aa24.86■■□□□ 1.57
CPNE1-205ENST00000401607 IGLV3-19P01714 112 aa24.86■■□□□ 1.57
CPNE1-205ENST00000401607 PRKCQQ04759 706 aa24.86■■□□□ 1.57
CPNE1-205ENST00000401607 GAS6Q14393 721 aa24.86■■□□□ 1.57
CPNE1-205ENST00000401607 RPS6KA2Q15349 733 aa24.86■■□□□ 1.57
CPNE1-205ENST00000401607 RFTN2Q52LD8 501 aaPredicted RBP24.86■■□□□ 1.57
CPNE1-205ENST00000401607 PDCD4Q53EL6 469 aaKnown RBP24.86■■□□□ 1.57
CPNE1-205ENST00000401607 WASHC2DQ5SRD0 308 aa24.86■■□□□ 1.57
CPNE1-205ENST00000401607 LIPJQ5W064 366 aa24.86■■□□□ 1.57
CPNE1-205ENST00000401607 C16orf89Q6UX73 402 aa24.86■■□□□ 1.57
CPNE1-205ENST00000401607 GALNT13Q8IUC8 556 aa24.86■■□□□ 1.57
CPNE1-205ENST00000401607 DCUN1D3Q8IWE4 304 aa24.86■■□□□ 1.57
CPNE1-205ENST00000401607 PGBD3Q8N328 593 aa24.86■■□□□ 1.57
CPNE1-205ENST00000401607 MTFMTQ96DP5 389 aaKnown RBP24.86■■□□□ 1.57
CPNE1-205ENST00000401607 BMFQ96LC9 184 aa24.86■■□□□ 1.57
CPNE1-205ENST00000401607 SGPP1Q9BX95 441 aa24.86■■□□□ 1.57
CPNE1-205ENST00000401607 BAIAP2L1Q9UHR4 511 aa24.86■■□□□ 1.57
CPNE1-205ENST00000401607 ACSL5Q9ULC5 683 aa24.86■■□□□ 1.57
CPNE1-205ENST00000401607 SNX6Q9UNH7 406 aa24.86■■□□□ 1.57
CPNE1-205ENST00000401607 H0Y8X5 98 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms