RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 PPFIBP2Q8ND30 876 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 NCSTNQ92542 709 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 HIST1H2AHQ96KK5 128 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 CCDC138Q96M89 665 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 HIST1H2AJQ99878 128 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 NUDT22Q9BRQ3 303 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 H2AFJQ9BTM1 129 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 LRRN3Q9H3W5 708 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 TMBIM4Q9HC24 238 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 HRASLS2Q9NWW9 162 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 CPSF2Q9P2I0 782 aaKnown RBP15.44■□□□□ 0.06
HMGA1-204ENST00000401473 FRYQ5TBA9 3013 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 NCF1BA6NI72 391 aaPredicted RBP15.44■□□□□ 0.06
HMGA1-204ENST00000401473 NCF1CA8MVU1 366 aaPredicted RBP15.44■□□□□ 0.06
HMGA1-204ENST00000401473 TARM1B6A8C7 271 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 E7ENX8 843 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 NTN3O00634 580 aaPredicted RBP15.44■□□□□ 0.06
HMGA1-204ENST00000401473 RPLP0P05388 317 aaKnown RBP15.44■□□□□ 0.06
HMGA1-204ENST00000401473 PROS1P07225 676 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 ENO2P09104 434 aaPredicted RBP15.44■□□□□ 0.06
HMGA1-204ENST00000401473 NCF1P14598 390 aaPredicted RBP15.44■□□□□ 0.06
HMGA1-204ENST00000401473 AMD1P17707 334 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 POLR2CP19387 275 aaPredicted RBP15.44■□□□□ 0.06
HMGA1-204ENST00000401473 KCNA4P22459 653 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 CSF2RBP32927 897 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 GPLD1P80108 840 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 TAP2Q03519 686 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 SQSTM1Q13501 440 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 CYP2A13Q16696 494 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 FBXO48Q5FWF7 155 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 LRRC56Q8IYG6 542 aaPredicted RBP15.44■□□□□ 0.06
HMGA1-204ENST00000401473 ARL8AQ96BM9 186 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 ATG10Q9H0Y0 220 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 EVA1BQ9NVM1 165 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 OR6C2Q9NZP2 312 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 TMEM9Q9P0T7 183 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 STOX2Q9P2F5 926 aaPredicted RBP15.44■□□□□ 0.06
HMGA1-204ENST00000401473 DCDC2Q9UHG0 476 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 EMCNQ9ULC0 261 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 RNF112Q9ULX5 631 aa15.44■□□□□ 0.06
HMGA1-204ENST00000401473 COL27A1Q8IZC6 1860 aaPredicted RBP15.43■□□□□ 0.06
HMGA1-204ENST00000401473 A0A1W2PPV9 198 aa15.43■□□□□ 0.06
HMGA1-204ENST00000401473 TK2O00142 265 aa15.43■□□□□ 0.06
HMGA1-204ENST00000401473 PRICKLE3O43900 615 aaPredicted RBP15.43■□□□□ 0.06
HMGA1-204ENST00000401473 OPA1O60313 960 aa15.43■□□□□ 0.06
HMGA1-204ENST00000401473 KERAO60938 352 aa15.43■□□□□ 0.06
HMGA1-204ENST00000401473 RFPL3O75679 317 aa15.43■□□□□ 0.06
HMGA1-204ENST00000401473 PEBP1P30086 187 aaKnown RBP15.43■□□□□ 0.06
HMGA1-204ENST00000401473 SHMT2P34897 504 aa15.43■□□□□ 0.06
HMGA1-204ENST00000401473 CRHR1P34998 444 aa15.43■□□□□ 0.06
HMGA1-204ENST00000401473 AP1S2P56377 157 aa15.43■□□□□ 0.06
HMGA1-204ENST00000401473 CLDN6P56747 220 aa15.43■□□□□ 0.06
HMGA1-204ENST00000401473 YBX1P67809 324 aaKnown RBP15.43■□□□□ 0.06
HMGA1-204ENST00000401473 ILKQ13418 452 aa15.43■□□□□ 0.06
HMGA1-204ENST00000401473 TSNAXIP1Q2TAA8 658 aa15.43■□□□□ 0.06
HMGA1-204ENST00000401473 C18orf21Q32NC0 220 aaPredicted RBP15.43■□□□□ 0.06
HMGA1-204ENST00000401473 KLC3Q6P597 504 aa15.43■□□□□ 0.06
HMGA1-204ENST00000401473 SUSD1Q6UWL2 747 aa15.43■□□□□ 0.06
HMGA1-204ENST00000401473 CROCCP2Q86T23 111 aa15.43■□□□□ 0.06
HMGA1-204ENST00000401473 OR10G6Q8NH81 332 aa15.43■□□□□ 0.06
HMGA1-204ENST00000401473 FLVCR1-AS1Q8TAF5 88 aa15.43■□□□□ 0.06
HMGA1-204ENST00000401473 RHBDF1Q96CC6 855 aa15.43■□□□□ 0.06
HMGA1-204ENST00000401473 AHCYL2Q96HN2 611 aaKnown RBP15.43■□□□□ 0.06
HMGA1-204ENST00000401473 PPM1MQ96MI6 270 aa15.43■□□□□ 0.06
HMGA1-204ENST00000401473 TRIM54Q9BYV2 358 aa15.43■□□□□ 0.06
HMGA1-204ENST00000401473 ABCG4Q9H172 646 aa15.43■□□□□ 0.06
HMGA1-204ENST00000401473 XPR1Q9UBH6 696 aa15.43■□□□□ 0.06
HMGA1-204ENST00000401473 LNPEPQ9UIQ6 1025 aa15.43■□□□□ 0.06
HMGA1-204ENST00000401473 PCDHGA1Q9Y5H4 931 aa15.43■□□□□ 0.06
HMGA1-204ENST00000401473 AKAP13Q12802 2813 aa15.43■□□□□ 0.06
HMGA1-204ENST00000401473 OR5K3A6NET4 321 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 UBXN8O00124 270 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 TAPBPO15533 448 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 SPAG7O75391 227 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 GSTA1P08263 222 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 CHRM5P08912 532 aaPredicted RBP15.42■□□□□ 0.06
HMGA1-204ENST00000401473 MPSTP25325 297 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 CAPZBP47756 277 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 CCT5P48643 541 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 PNLIPRP1P54315 467 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 CDKL1Q00532 357 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 INSM1Q01101 510 aaPredicted RBP15.42■□□□□ 0.06
HMGA1-204ENST00000401473 ARHGAP19Q14CB8 494 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 ANKS6Q68DC2 871 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 AGTRAPQ6RW13 159 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 DHRS13Q6UX07 377 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 FRA10AC1Q70Z53 315 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 TAX1BP1Q86VP1 789 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 OR2L8Q8NGY9 312 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 HMGCLL1Q8TB92 370 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 EXT2Q93063 718 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 ESAMQ96AP7 390 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 PYCR2Q96C36 320 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 SCYL1Q96KG9 808 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 RUFY1Q96T51 708 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 MRPL57Q9BQC6 102 aaKnown RBP15.42■□□□□ 0.06
HMGA1-204ENST00000401473 INTS7Q9NVH2 962 aaKnown RBP15.42■□□□□ 0.06
HMGA1-204ENST00000401473 FAM221BA6H8Z2 402 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 COPEO14579 308 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 CAPN5O15484 640 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms