RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 HIST1H2AAQ96QV6 131 aa5.28□□□□□ -1.56
HMGB3P7-201ENST00000400214 TSG101Q99816 390 aa5.28□□□□□ -1.56
HMGB3P7-201ENST00000400214 VKORC1Q9BQB6 163 aa5.28□□□□□ -1.56
HMGB3P7-201ENST00000400214 NDC1Q9BTX1 674 aa5.28□□□□□ -1.56
HMGB3P7-201ENST00000400214 ZSCAN5AQ9BUG6 496 aa5.28□□□□□ -1.56
HMGB3P7-201ENST00000400214 KRTAP4-9Q9BYQ8 210 aa5.28□□□□□ -1.56
HMGB3P7-201ENST00000400214 RAB33BQ9H082 229 aa5.28□□□□□ -1.56
HMGB3P7-201ENST00000400214 CARD9Q9H257 536 aa5.28□□□□□ -1.56
HMGB3P7-201ENST00000400214 FAM124BQ9H5Z6 455 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P7-201ENST00000400214 GCM1Q9NP62 436 aa5.28□□□□□ -1.56
HMGB3P7-201ENST00000400214 RRAGDQ9NQL2 400 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P7-201ENST00000400214 C20orf141Q9NUB4 165 aa5.28□□□□□ -1.56
HMGB3P7-201ENST00000400214 TMEM51Q9NW97 253 aa5.28□□□□□ -1.56
HMGB3P7-201ENST00000400214 UBAP1Q9NZ09 502 aa5.28□□□□□ -1.56
HMGB3P7-201ENST00000400214 MOCS1Q9NZB8 636 aa5.28□□□□□ -1.56
HMGB3P7-201ENST00000400214 IL1RAPL1Q9NZN1 696 aa5.28□□□□□ -1.56
HMGB3P7-201ENST00000400214 TNFRSF10DQ9UBN6 386 aa5.28□□□□□ -1.56
HMGB3P7-201ENST00000400214 BAIAP2L1Q9UHR4 511 aa5.28□□□□□ -1.56
HMGB3P7-201ENST00000400214 IPO11Q9UI26 975 aaKnown RBP5.28□□□□□ -1.56
HMGB3P7-201ENST00000400214 RIMKLBQ9ULI2 386 aa5.28□□□□□ -1.56
HMGB3P7-201ENST00000400214 SNX6Q9UNH7 406 aa5.28□□□□□ -1.56
HMGB3P7-201ENST00000400214 COQ4Q9Y3A0 265 aa5.28□□□□□ -1.56
HMGB3P7-201ENST00000400214 INSL5Q9Y5Q6 135 aa5.28□□□□□ -1.56
HMGB3P7-201ENST00000400214 KMT2EQ8IZD2 1858 aa5.28□□□□□ -1.56
HMGB3P7-201ENST00000400214 TICRRQ7Z2Z1 1910 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 MYO18AQ92614 2054 aaKnown RBP5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 A0A087WV48 116 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 TBC1D3DA0A087WVF3 549 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 TBC1D3IA0A087WXS9 549 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 TBC1D3EA0A087X179 549 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 TBC1D3KA0A087X1G2 549 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 A0A1B0GWJ7 208 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 TBC1D3BA6NDS4 549 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 TBC1D3FA6NER0 549 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 C2CD4DB7Z1M9 353 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 TBC1D3LB9A6J9 549 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 E2F3O00716 465 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 PRRG1O14668 218 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 SLC30A4O14863 429 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 CCL16O15467 120 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 BUB1O43683 1085 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 SPOPO43791 374 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 STX10O60499 249 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 ZNF821O75541 412 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 DAB1O75553 588 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 IPO7O95373 1038 aaKnown RBP5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 ASS1P00966 412 aaKnown RBP5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 GASTP01350 101 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 RHOP08100 348 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 SRPRAP08240 638 aaKnown RBP5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 COL4A2P08572 1712 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 FGF4P08620 206 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 OR4Q2P0C623 313 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 TBC1D3HP0C7X1 549 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 GLI4P10075 376 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 CTPS1P17812 591 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 HNRNPA2B1P22626 353 aaKnown RBP5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 PTPN4P29074 926 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 TUFMP49411 452 aaKnown RBP5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 MVDP53602 400 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 GALCP54803 685 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 PRRX1P54821 245 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 HADHBP55084 474 aaKnown RBP5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 MYL7Q01449 175 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 CYP27A1Q02318 531 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 EGR3Q06889 387 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 SLC20A2Q08357 652 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 GRSF1Q12849 480 aaKnown RBP eCLIP5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 DOC2AQ14183 400 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 STILQ15468 1287 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 WDR72Q3MJ13 1102 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 MGAT5BQ3V5L5 792 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 FASTKD1Q53R41 847 aaKnown RBP5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 RALGPS1Q5JS13 557 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 TCTE1Q5JU00 501 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 KRT39Q6A163 491 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 TBC1D3GQ6DHY5 549 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 TBC1D3CQ6IPX1 549 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 CES3Q6UWW8 571 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 CFAP77Q6ZQR2 320 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 MTSS1LQ765P7 747 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 TAS2R42Q7RTR8 314 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 GRASPQ7Z6J2 395 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 FRMD5Q7Z6J6 570 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 CENPVQ7Z7K6 275 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 SYVN1Q86TM6 617 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 CUZD1Q86UP6 607 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 DCP1BQ8IZD4 617 aaKnown RBP5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 TBC1D3Q8IZP1 549 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 CARFQ8N187 725 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 DTWD1Q8N5C7 304 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 LEMD2Q8NC56 503 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 CCNYQ8ND76 341 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 MCUQ8NE86 351 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 EXT2Q93063 718 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 SCAMP4Q969E2 229 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 NKD2Q969F2 451 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 PSMG2Q969U7 264 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 SLC35C1Q96A29 364 aa5.27□□□□□ -1.57
HMGB3P7-201ENST00000400214 TMEM176AQ96HP8 235 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms