RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 PON2Q15165 354 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 LRRC26Q2I0M4 334 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 TJAP1Q5JTD0 557 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 MFSD14CQ5VZR4 134 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 PNCKQ6P2M8 343 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 TAC4Q86UU9 113 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 RAB43Q86YS6 212 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 SOCS4Q8WXH5 440 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 SLC38A4Q969I6 547 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 PRKD2Q9BZL6 878 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 TIGARQ9NQ88 270 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 ZNF451Q9Y4E5 1061 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 ERVH48-1M5A8F1 160 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 AOC2O75106 756 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 DNAJB5O75953 348 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 PBX3P40426 434 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 IDH2P48735 452 aaKnown RBP16.7■□□□□ 0.26
PTPRA-205ENST00000399903 DSC2Q02487 901 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 AP5B1Q2VPB7 878 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 ZDHHC21Q8IVQ6 265 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 NETO1Q8TDF5 533 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 FAM120BQ96EK7 910 aaKnown RBP16.7■□□□□ 0.26
PTPRA-205ENST00000399903 MAT2BQ9NZL9 334 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 ARL5AQ9Y689 179 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 OR6C70A6NIJ9 312 aa16.69■□□□□ 0.26
PTPRA-205ENST00000399903 SCO1O75880 301 aa16.69■□□□□ 0.26
PTPRA-205ENST00000399903 GLP2RO95838 553 aa16.69■□□□□ 0.26
PTPRA-205ENST00000399903 ZNF648Q5T619 568 aaPredicted RBP16.69■□□□□ 0.26
PTPRA-205ENST00000399903 SERINC5Q86VE9 423 aa16.69■□□□□ 0.26
PTPRA-205ENST00000399903 HORMAD1Q86X24 394 aa16.69■□□□□ 0.26
PTPRA-205ENST00000399903 HIPK1Q86Z02 1210 aa16.69■□□□□ 0.26
PTPRA-205ENST00000399903 FAM20CQ8IXL6 584 aa16.69■□□□□ 0.26
PTPRA-205ENST00000399903 OR13C4Q8NGS5 318 aa16.69■□□□□ 0.26
PTPRA-205ENST00000399903 MAP6Q96JE9 813 aa16.69■□□□□ 0.26
PTPRA-205ENST00000399903 RDH12Q96NR8 316 aa16.69■□□□□ 0.26
PTPRA-205ENST00000399903 ASB2Q96Q27 587 aa16.69■□□□□ 0.26
PTPRA-205ENST00000399903 ABI2Q9NYB9 513 aaPredicted RBP16.69■□□□□ 0.26
PTPRA-205ENST00000399903 ASB1Q9Y576 335 aa16.69■□□□□ 0.26
PTPRA-205ENST00000399903 GRK5P34947 590 aa16.69■□□□□ 0.26
PTPRA-205ENST00000399903 ZFP36L2P47974 494 aaKnown RBP16.69■□□□□ 0.26
PTPRA-205ENST00000399903 TYSND1Q2T9J0 566 aa16.69■□□□□ 0.26
PTPRA-205ENST00000399903 C18orf21Q32NC0 220 aaPredicted RBP16.69■□□□□ 0.26
PTPRA-205ENST00000399903 ZNF549Q6P9A3 640 aa16.69■□□□□ 0.26
PTPRA-205ENST00000399903 LIMS2Q7Z4I7 341 aa16.69■□□□□ 0.26
PTPRA-205ENST00000399903 ZFAND4Q86XD8 727 aa16.69■□□□□ 0.26
PTPRA-205ENST00000399903 TRIM63Q969Q1 353 aa16.69■□□□□ 0.26
PTPRA-205ENST00000399903 MED30Q96HR3 178 aa16.69■□□□□ 0.26
PTPRA-205ENST00000399903 CDADC1Q9BWV3 514 aa16.69■□□□□ 0.26
PTPRA-205ENST00000399903 RNF186Q9NXI6 227 aa16.69■□□□□ 0.26
PTPRA-205ENST00000399903 IKZF3Q9UKT9 509 aa16.69■□□□□ 0.26
PTPRA-205ENST00000399903 TLL1O43897 1013 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 TMCC2O75069 709 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 GJB3O75712 270 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 DNAJB2P25686 324 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 CREMQ03060 361 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 KRR1Q13601 381 aaKnown RBP16.68■□□□□ 0.26
PTPRA-205ENST00000399903 DDR2Q16832 855 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 COQ5Q5HYK3 327 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 FAAH2Q6GMR7 532 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 GPRIN3Q6ZVF9 776 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 SNAPC3Q92966 411 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 REXO5Q96IC2 774 aaKnown RBP16.68■□□□□ 0.26
PTPRA-205ENST00000399903 SNX18Q96RF0 628 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 ZBTB18Q99592 522 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 KRT84Q9NSB2 600 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 M0R129 80 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 VPS4BO75351 444 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 PAPSS2O95340 614 aaPredicted RBP16.68■□□□□ 0.26
PTPRA-205ENST00000399903 CHRNEQ04844 493 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 DMC1Q14565 340 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 PCBP1Q15365 356 aaKnown RBP eCLIP16.68■□□□□ 0.26
PTPRA-205ENST00000399903 Q5BKY6 102 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 CARD16Q5EG05 197 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 BRMS1LQ5PSV4 323 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 FAM217AQ8IXS0 508 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 STAG3L4Q8TBR4 150 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 PIK3R3Q92569 461 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 MTFMTQ96DP5 389 aaKnown RBP16.68■□□□□ 0.26
PTPRA-205ENST00000399903 AGO1Q9UL18 857 aaKnown RBP16.68■□□□□ 0.26
PTPRA-205ENST00000399903 DSCR3O14972 297 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 CREG1O75629 220 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 TGFBR2P37173 567 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 LHX1P48742 406 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 RPL34P49207 117 aaKnown RBP16.68■□□□□ 0.26
PTPRA-205ENST00000399903 ZNF135P52742 658 aaPredicted RBP16.68■□□□□ 0.26
PTPRA-205ENST00000399903 RANBP10Q6VN20 620 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 BPHLQ86WA6 291 aaPredicted RBP16.68■□□□□ 0.26
PTPRA-205ENST00000399903 PJA1Q8NG27 643 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 DUSP21Q9H596 190 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 TAS2R16Q9NYV7 291 aa16.68■□□□□ 0.26
PTPRA-205ENST00000399903 SAMHD1Q9Y3Z3 626 aaKnown RBP16.68■□□□□ 0.26
PTPRA-205ENST00000399903 GPR182O15218 404 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 MLYCDO95822 493 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 MSH3P20585 1137 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 CRISP3P54108 245 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 PWP1Q13610 501 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 GBX1Q14549 363 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 RFTN2Q52LD8 501 aaPredicted RBP16.67■□□□□ 0.26
PTPRA-205ENST00000399903 ZMAT1Q5H9K5 638 aa16.67■□□□□ 0.26
PTPRA-205ENST00000399903 SPANXN4Q5MJ08 99 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms