RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 CHMP24386 653 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 RPL10P27635 214 aaKnown RBP10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 PREPP48147 710 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 VAMP2P63027 116 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 ST3GAL4Q11206 333 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 ENPP2Q13822 863 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 BICRALQ6AI39 1079 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 MTFR2Q6P444 385 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 FAM131AQ6UXB0 335 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 DLK2Q6UY11 383 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 LYSMD3Q7Z3D4 306 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 CAMKVQ8NCB2 501 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 FOXJ1Q92949 421 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 TEFMQ96QE5 360 aaKnown RBP10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 TMPRSS11EQ9UL52 423 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 TPST2O60704 377 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 CD247P20963 164 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 SSTR1P30872 391 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 FRG1Q14331 258 aaKnown RBP10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 ECHDC2Q86YB7 292 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 KLHL4Q9C0H6 718 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 ADAP2Q9NPF8 381 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 DERAQ9Y315 318 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 MON2Q7Z3U7 1717 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 A0A0A0MRY4 1105 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 RBM47A0AV96 593 aaKnown RBP10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 MEN1O00255 615 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 HSPA12AO43301 675 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 CLPTM1O96005 669 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 IGFBP1P08833 259 aaPredicted RBP10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 CD53P19397 219 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 ADRA1DP25100 572 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 CLCNKAP51800 687 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 AUHQ13825 339 aaKnown RBP10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 RCAN2Q14206 197 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 LYSMD4Q5XG99 296 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 SPATA13Q96N96 652 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 PLEKHG4BQ96PX9 1271 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 CACNG4Q9UBN1 327 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 KCNK6Q9Y257 313 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 CFL2Q9Y281 166 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 PCDHB1Q9Y5F3 818 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 PCDHGC4Q9Y5F7 938 aa10.76□□□□□ -0.69
CACNA1C-216ENST00000399638 TCF4P15884 667 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 AQP1P29972 269 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 RAB4BP61018 213 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 TXNL4AP83876 142 aaKnown RBP10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 GNA12Q03113 381 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 RAET1LQ5VY80 246 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 PDE12Q6L8Q7 609 aaKnown RBP10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 CD300LFQ8TDQ1 290 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 TCP10LQ8TDR4 215 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 RORBQ92753 470 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 DLG3Q92796 817 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 BAIAP2Q9UQB8 552 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 SMIM28A0A1B0GU29 152 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 CASC3O15234 703 aaKnown RBP10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 SSTP61278 116 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 DCST1Q5T197 706 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 ABHD17BQ5VST6 288 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 SMARCD3Q6STE5 483 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 ZDHHC13Q8IUH4 622 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 B3GNT4Q9C0J1 378 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 TMEM98Q9Y2Y6 226 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 ARHGAP23Q9P227 1491 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 A0A1W2PPL8 197 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 RPP40O75818 363 aaKnown RBP10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 PSMG1O95456 288 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 NCBP2P52298 156 aaKnown RBP eCLIP10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 ZNF542PQ5EBM4 170 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 PRICKLE2Q7Z3G6 844 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 NET1Q7Z628 596 aaPredicted RBP10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 HORMAD2Q8N7B1 307 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 CNTD1Q8N815 330 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 TBC1D15Q8TC07 691 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 ITFG2Q969R8 447 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 OR1F2PQ96R84 312 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 SGIP1Q9BQI5 828 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 A0A0G2JLL6 359 aaPredicted RBP10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 A0A0U1RQK1 487 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 OR1I1O60431 355 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 P04436 131 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 RARAP10276 462 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 IL7RP16871 459 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 KDELR1P24390 212 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 MSLNQ13421 630 aaPredicted RBP10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 RUNX2Q13950 521 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 NR0B2Q15466 257 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 TMEM119Q4V9L6 283 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 PTCHD4Q6ZW05 846 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 PRRT2Q7Z6L0 340 aaPredicted RBP10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 LRRTM4Q86VH4 590 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 HMCESQ96FZ2 354 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 TMEM175Q9BSA9 504 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 RBCK1Q9BYM8 510 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 DEFB126Q9BYW3 111 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 DGKBQ9Y6T7 804 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 TSPAN5P62079 268 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 PRKCDQ05655 676 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 CTBP1Q13363 440 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms