RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 HCN4Q9Y3Q4 1203 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 MAFO75444 373 aaPredicted RBP9.12□□□□□ -0.95
COL28A1-201ENST00000399429 KLHL18O94889 574 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 KCNK2O95069 426 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 S100A6P06703 90 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 FCER2P06734 321 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 FPR1P21462 350 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 NNMTP40261 264 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 GDI2P50395 445 aaKnown RBP9.12□□□□□ -0.95
COL28A1-201ENST00000399429 TTLL4Q14679 1199 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 SETMARQ53H47 684 aaPredicted RBP9.12□□□□□ -0.95
COL28A1-201ENST00000399429 SOWAHCQ53LP3 525 aaPredicted RBP9.12□□□□□ -0.95
COL28A1-201ENST00000399429 C6orf136Q5SQH8 315 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 TSTD2Q5T7W7 516 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 FAM205BPQ63HN1 556 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 KIAA0930Q6ICG6 404 aaPredicted RBP9.12□□□□□ -0.95
COL28A1-201ENST00000399429 TXNDC11Q6PKC3 985 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 DEF8Q6ZN54 512 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 B3GNT8Q7Z7M8 397 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 CYP4Z1Q86W10 505 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 GALNT13Q8IUC8 556 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 SPNS2Q8IVW8 549 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 TRPV1Q8NER1 839 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 ASB15Q8WXK1 588 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 PIGKQ92643 395 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 TANKQ92844 425 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 NEDD4LQ96PU5 975 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 FAM129BQ96TA1 746 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 DOK1Q99704 481 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 TTPALQ9BTX7 342 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 COLEC11Q9BWP8 271 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 MCUBQ9NWR8 336 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 ERAP1Q9NZ08 941 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 ZIM2Q9NZV7 527 aa9.12□□□□□ -0.95
COL28A1-201ENST00000399429 CDV3Q9UKY7 258 aaKnown RBP9.12□□□□□ -0.95
COL28A1-201ENST00000399429 SPIN1Q9Y657 262 aaPredicted RBP9.12□□□□□ -0.95
COL28A1-201ENST00000399429 CICQ96RK0 1608 aaPredicted RBP9.12□□□□□ -0.95
COL28A1-201ENST00000399429 B3GALNT1O75752 331 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 GSRP00390 522 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 WARSP23381 471 aaKnown RBP9.11□□□□□ -0.95
COL28A1-201ENST00000399429 HTR3AP46098 478 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 HSPA7P48741 367 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 CAMK2GQ13555 558 aaPredicted RBP9.11□□□□□ -0.95
COL28A1-201ENST00000399429 IQCCQ4KMZ1 466 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 C10orf62Q5T681 223 aaPredicted RBP9.11□□□□□ -0.95
COL28A1-201ENST00000399429 ANKRD34AQ69YU3 496 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 FUNDC1Q8IVP5 155 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 Q8N402 240 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 RTL3Q8N8U3 475 aaKnown RBP9.11□□□□□ -0.95
COL28A1-201ENST00000399429 GPR151Q8TDV0 419 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 APOLD1Q96LR9 279 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 HYLS1Q96M11 299 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 SEMA3CQ99985 751 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 KLHL31Q9H511 634 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 MS4A12Q9NXJ0 267 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 MBD2Q9UBB5 411 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 DNMT3LQ9UJW3 386 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 GSAPA4D1B5 854 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 H7C2Y5 167 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 SLC30A4O14863 429 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 KPNA5O15131 536 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 TSPAN1O60635 241 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 APBA3O96018 575 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 IFNA14P01570 189 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 POLR2CP19387 275 aaPredicted RBP9.11□□□□□ -0.95
COL28A1-201ENST00000399429 MAGEA6P43360 314 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 STARP49675 285 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 AGTR2P50052 363 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 UGT2B15P54855 530 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 GPLD1P80108 840 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 IFITM3Q01628 133 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 SLAMF1Q13291 335 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 FLYWCH1Q4VC44 716 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 USP39Q53GS9 565 aaKnown RBP9.11□□□□□ -0.95
COL28A1-201ENST00000399429 PLCZ1Q86YW0 608 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 MEIOBQ8N635 442 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 EXOC2Q96KP1 924 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 ART5Q96L15 291 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 C8orf48Q96LL4 319 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 HAPLN2Q9GZV7 340 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 XYLT2Q9H1B5 865 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 TLR8Q9NR97 1041 aaKnown RBP9.11□□□□□ -0.95
COL28A1-201ENST00000399429 FBXO8Q9NRD0 319 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 DNAJC11Q9NVH1 559 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 UBQLN2Q9UHD9 624 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 CRLS1Q9UJA2 301 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 RIPK3Q9Y572 518 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 MAB21L2Q9Y586 359 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 M0R233 179 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 DPYSL4O14531 572 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 AP3D1O14617 1153 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 HCRTO43612 131 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 INSRRP14616 1297 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 EPB42P16452 691 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 UBA1P22314 1058 aaKnown RBP9.11□□□□□ -0.95
COL28A1-201ENST00000399429 KCNC1P48547 511 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 FCGRTP55899 365 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 PITX1P78337 314 aaPredicted RBP9.11□□□□□ -0.95
COL28A1-201ENST00000399429 EMX2Q04743 252 aa9.11□□□□□ -0.95
COL28A1-201ENST00000399429 FAPQ12884 760 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms