RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 RAB17Q9H0T7 212 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 FAM60AQ9NP50 221 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 SAYSD1Q9NPB0 183 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 MOCS1Q9NZB8 636 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 KLHL20Q9Y2M5 609 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 MRFAP1Q9Y605 127 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 PSAT1Q9Y617 370 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 COMMD10Q9Y6G5 202 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 FAM208BQ5VWN6 2430 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 LOC101059948A0A1B0GTJ6 334 aa13.6□□□□□ -0.23
HLA-DQB1-202ENST00000399079 ARHGEF33A8MVX0 844 aa13.6□□□□□ -0.23
HLA-DQB1-202ENST00000399079 HCRTR1O43613 425 aa13.6□□□□□ -0.23
HLA-DQB1-202ENST00000399079 VPS26AO75436 327 aa13.6□□□□□ -0.23
HLA-DQB1-202ENST00000399079 PSIP1O75475 530 aaKnown RBP13.6□□□□□ -0.23
HLA-DQB1-202ENST00000399079 NTRK1P04629 796 aa13.6□□□□□ -0.23
HLA-DQB1-202ENST00000399079 MCM3P25205 808 aa13.6□□□□□ -0.23
HLA-DQB1-202ENST00000399079 SSTR1P30872 391 aa13.6□□□□□ -0.23
HLA-DQB1-202ENST00000399079 ATP1A2P50993 1020 aa13.6□□□□□ -0.23
HLA-DQB1-202ENST00000399079 COL9A2Q14055 689 aaPredicted RBP13.6□□□□□ -0.23
HLA-DQB1-202ENST00000399079 KIR2DS3Q14952 304 aa13.6□□□□□ -0.23
HLA-DQB1-202ENST00000399079 TTLL9Q3SXZ7 439 aa13.6□□□□□ -0.23
HLA-DQB1-202ENST00000399079 TMTC4Q5T4D3 741 aa13.6□□□□□ -0.23
HLA-DQB1-202ENST00000399079 C8orf74Q6P047 294 aa13.6□□□□□ -0.23
HLA-DQB1-202ENST00000399079 ZDHHC24Q6UX98 284 aa13.6□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CYHR1Q6ZMK1 362 aa13.6□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CDHR3Q6ZTQ4 885 aa13.6□□□□□ -0.23
HLA-DQB1-202ENST00000399079 GPR155Q7Z3F1 870 aa13.6□□□□□ -0.23
HLA-DQB1-202ENST00000399079 OR2L8Q8NGY9 312 aa13.6□□□□□ -0.23
HLA-DQB1-202ENST00000399079 GABPB2Q8TAK5 448 aaPredicted RBP13.6□□□□□ -0.23
HLA-DQB1-202ENST00000399079 PYROXD1Q8WU10 500 aa13.6□□□□□ -0.23
HLA-DQB1-202ENST00000399079 INPP5DQ92835 1189 aa13.6□□□□□ -0.23
HLA-DQB1-202ENST00000399079 ZFATQ9P243 1243 aa13.6□□□□□ -0.23
HLA-DQB1-202ENST00000399079 IGSF10Q6WRI0 2623 aa13.6□□□□□ -0.23
HLA-DQB1-202ENST00000399079 A0A0J9YY10 115 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 TMEM150CB9EJG8 249 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 SPTBP11277 2137 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 LIFP15018 202 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 MAP4P27816 1152 aaKnown RBP13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 PSMB5P28074 263 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CCNFP41002 786 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CBLBQ13191 982 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 FASTKQ14296 549 aaKnown RBP13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 DEFB110Q30KQ9 67 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 PAQR3Q6TCH7 311 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 PIWIL4Q7Z3Z4 852 aaKnown RBP13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 GALNT7Q86SF2 657 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 GPATCH11Q8N954 259 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 C19orf47Q8N9M1 422 aaKnown RBP13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 SLC38A9Q8NBW4 561 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 NOA1Q8NC60 698 aaKnown RBP13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 OR1L3Q8NH93 324 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 EEF1AKMT1Q8WVE0 214 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 AKIRIN1Q9H9L7 192 aaPredicted RBP13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 SMYD2Q9NRG4 433 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 TAS2R13Q9NYV9 303 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 KLHL42Q9P2K6 505 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 TRMT6Q9UJA5 497 aaKnown RBP13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 PCDHGA4Q9Y5G9 962 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 PRICKLE3O43900 615 aaPredicted RBP13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 MAGP20916 626 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CYP4F2P78329 520 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 MGAT5Q09328 741 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 FRG1Q14331 258 aaKnown RBP13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 SF1Q15637 639 aaKnown RBP13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 SLC5A12Q1EHB4 618 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 KIAA1614Q5VZ46 1190 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CYB5D1Q6P9G0 228 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 C6orf15Q6UXA7 325 aaPredicted RBP13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 NEK10Q6ZWH5 1172 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CCDC25Q86WR0 208 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 TMEM126BQ8IUX1 230 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 PALM2Q8IXS6 379 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 ESX1Q8N693 406 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 MAGEC3Q8TD91 643 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 SNRNP27Q8WVK2 155 aaKnown RBP13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 ASB11Q8WXH4 323 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 OLFM1Q99784 485 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 RAB11FIP5Q9BXF6 653 aa13.59□□□□□ -0.23
HLA-DQB1-202ENST00000399079 SNRNP200O75643 2136 aaKnown RBP13.58□□□□□ -0.23
HLA-DQB1-202ENST00000399079 A0A1W2PPV9 198 aa13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 GFYI3L273 518 aa13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 EIF3HO15372 352 aaKnown RBP eCLIP13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 MAP3K7O43318 606 aa13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 SCRG1O75711 98 aa13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CATP04040 527 aaKnown RBP13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CTSBP07858 339 aa13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 ENO3P13929 434 aaPredicted RBP13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 F8A1P23610 371 aa13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 STAT5AP42229 794 aa13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 YBX1P67809 324 aaKnown RBP13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 GUCY2DQ02846 1103 aa13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 ABHD18Q0P651 414 aa13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 HECTD2Q5U5R9 776 aa13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 UGT3A1Q6NUS8 523 aa13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 FAM199XQ6PEV8 388 aaPredicted RBP13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 SUSD1Q6UWL2 747 aa13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 STRA8Q7Z7C7 330 aa13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 BPHLQ86WA6 291 aaPredicted RBP13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 OR9A1PQ8NGU1 263 aa13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 DLG3Q92796 817 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 5.5 ms