RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 MBOAT1Q6ZNC8 495 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 CPSF7Q8N684 471 aaKnown RBP8.07□□□□□ -1.12
PTPRD-204ENST00000397606 GLB1L3Q8NCI6 653 aaPredicted RBP8.07□□□□□ -1.12
PTPRD-204ENST00000397606 TSACCQ96A04 125 aaPredicted RBP8.07□□□□□ -1.12
PTPRD-204ENST00000397606 NMUR2Q9GZQ4 415 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 CAAP1Q9H8G2 361 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 STX18Q9P2W9 335 aaKnown RBP8.07□□□□□ -1.12
PTPRD-204ENST00000397606 TMCC3Q9ULS5 477 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 MMP17Q9ULZ9 603 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 MYO18AQ92614 2054 aaKnown RBP8.07□□□□□ -1.12
PTPRD-204ENST00000397606 FAM47E-STBD1D6RA91 191 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 VNN2O95498 520 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 PRSS56P0CW18 603 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 PTX3P26022 381 aaPredicted RBP8.07□□□□□ -1.12
PTPRD-204ENST00000397606 MMP12P39900 470 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 GDF5P43026 501 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 AVPR1BP47901 424 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 RXRGP48443 463 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 CDKN1CP49918 316 aaPredicted RBP8.07□□□□□ -1.12
PTPRD-204ENST00000397606 POLR2JP52435 117 aaKnown RBP8.07□□□□□ -1.12
PTPRD-204ENST00000397606 CORO7P57737 925 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 CREB5Q02930 508 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 ZC3H12BQ5HYM0 836 aaKnown RBP8.07□□□□□ -1.12
PTPRD-204ENST00000397606 ZNF678Q5SXM1 525 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 VWA5B1Q5TIE3 1220 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 TMIGD1Q6UXZ0 262 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 Q6ZSR6 202 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 TRPV3Q8NET8 790 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 CLHC1Q8NHS4 586 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 SETD7Q8WTS6 366 aaKnown RBP8.07□□□□□ -1.12
PTPRD-204ENST00000397606 CMTM7Q96FZ5 175 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 FADS3Q9Y5Q0 445 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 A0A0U1RQS6 177 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 C2orf74A8MZ97 194 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 PLA2G16P53816 162 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 ESRRGP62508 458 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 FOXM1Q08050 763 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 C1orf61Q13536 156 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 LYSMD4Q5XG99 296 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 ZNF534Q76KX8 674 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 CLNKQ7Z7G1 428 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 NUDT13Q86X67 352 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 OXR1Q8N573 874 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 RCN3Q96D15 328 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 CDK15Q96Q40 435 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 UGT2B28Q9BY64 529 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 NDEL1Q9GZM8 345 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 SLC40A1Q9NP59 571 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 KRCC1Q9NPI7 259 aaPredicted RBP8.07□□□□□ -1.12
PTPRD-204ENST00000397606 NCDNQ9UBB6 729 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 CDC14AQ9UNH5 594 aa8.07□□□□□ -1.12
PTPRD-204ENST00000397606 LOC730098B7Z3J9 87 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 B3GALT2O43825 422 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 HS6ST1O60243 411 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 C1SP09871 688 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 BMP8BP34820 402 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 MAGEA3P43357 314 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 IDH3AP50213 366 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 DCDC1P59894 354 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 ERVK-8P63133 956 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 IRF4Q15306 451 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 DPY19L1Q2PZI1 675 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 TYSND1Q2T9J0 566 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 KIAA0895LQ68EN5 471 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 DENND5AQ6IQ26 1287 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 FRMD7Q6ZUT3 714 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 CHCHD4Q8N4Q1 142 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 ZNF555Q8NEP9 628 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 OR4F6Q8NGB9 312 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 ZCCHC10Q8TBK6 192 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 DNAJB14Q8TBM8 379 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 RLN3Q8WXF3 142 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 POP5Q969H6 163 aaKnown RBP8.06□□□□□ -1.12
PTPRD-204ENST00000397606 HOPXQ9BPY8 73 aaPredicted RBP8.06□□□□□ -1.12
PTPRD-204ENST00000397606 HRASLS2Q9NWW9 162 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 SPATA7Q9P0W8 599 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 RPS6KB2Q9UBS0 482 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 COLQQ9Y215 455 aaPredicted RBP8.06□□□□□ -1.12
PTPRD-204ENST00000397606 MLLT3P42568 568 aaPredicted RBP8.06□□□□□ -1.12
PTPRD-204ENST00000397606 RPS14P62263 151 aaKnown RBP8.06□□□□□ -1.12
PTPRD-204ENST00000397606 YPEL5P62699 121 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 ABATP80404 500 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 CSTF1Q05048 431 aaKnown RBP8.06□□□□□ -1.12
PTPRD-204ENST00000397606 VAC14Q08AM6 782 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 CSTF3Q12996 717 aaKnown RBP8.06□□□□□ -1.12
PTPRD-204ENST00000397606 NFE2L1Q14494 772 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 SLC9A5Q14940 896 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 UAP1L1Q3KQV9 507 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 SPIN4Q56A73 249 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 DHDDSQ86SQ9 333 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 TBC1D21Q8IYX1 336 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 GJD3Q8N144 294 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 RNF148Q8N7C7 305 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 SPPL2AQ8TCT8 520 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 NAT14Q8WUY8 206 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 NCSTNQ92542 709 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 MYEOVQ96EZ4 313 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 ZDHHC12Q96GR4 267 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 HSPA12BQ96MM6 686 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 TBCDQ9BTW9 1192 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms