RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 FGF11Q92914 225 aa20.49■□□□□ 0.87
TSPAN4-206ENST00000397408 TAAR9Q96RI9 348 aa20.49■□□□□ 0.87
TSPAN4-206ENST00000397408 CYTH2Q99418 400 aa20.49■□□□□ 0.87
TSPAN4-206ENST00000397408 GPR22Q99680 433 aa20.49■□□□□ 0.87
TSPAN4-206ENST00000397408 ACSS3Q9H6R3 686 aa20.49■□□□□ 0.87
TSPAN4-206ENST00000397408 CAB39LQ9H9S4 337 aa20.49■□□□□ 0.87
TSPAN4-206ENST00000397408 SOHLH2Q9NX45 425 aa20.49■□□□□ 0.87
TSPAN4-206ENST00000397408 FOXJ2Q9P0K8 574 aa20.49■□□□□ 0.87
TSPAN4-206ENST00000397408 DMXL2Q8TDJ6 3036 aa20.49■□□□□ 0.87
TSPAN4-206ENST00000397408 SLC9B1P1A6NJY1 282 aa20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 GFYI3L273 518 aa20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 TAF4O00268 1085 aa20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 NVLO15381 856 aaKnown RBP20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 ZBTB14O43829 449 aa20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 SYF2O95926 243 aaKnown RBP20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 PVRP15151 417 aa20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 ST6GAL1P15907 406 aa20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 SPRP35270 261 aaPredicted RBP20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 RAB15P59190 212 aa20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 POU4F1Q01851 419 aa20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 FOXM1Q08050 763 aa20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 KCNAB1Q14722 419 aa20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 TMEM164Q5U3C3 297 aa20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 TMEM207Q6UWW9 146 aa20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 CEP97Q8IW35 865 aa20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 FBXO15Q8NCQ5 510 aaPredicted RBP20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 SNIP1Q8TAD8 396 aaKnown RBP20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 FLVCR1-AS1Q8TAF5 88 aa20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 MRRFQ96E11 262 aaKnown RBP20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 PKP4Q99569 1192 aa20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 CTRCQ99895 268 aa20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 DDA1Q9BW61 102 aa20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 KLHL25Q9H0H3 589 aa20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 APMAPQ9HDC9 416 aa20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 LNPEPQ9UIQ6 1025 aa20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 ADAMTS6Q9UKP5 1117 aa20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 ZMIZ1Q9ULJ6 1067 aa20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 RAXQ9Y2V3 346 aa20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 ANKRD11Q6UB99 2663 aaPredicted RBP20.48■□□□□ 0.87
TSPAN4-206ENST00000397408 C8GP07360 202 aa20.47■□□□□ 0.87
TSPAN4-206ENST00000397408 FAM153BP0C7A2 387 aa20.47■□□□□ 0.87
TSPAN4-206ENST00000397408 EBLN1P0CF75 366 aa20.47■□□□□ 0.87
TSPAN4-206ENST00000397408 PCBP4P57723 403 aaKnown RBP20.47■□□□□ 0.87
TSPAN4-206ENST00000397408 HSD11B2P80365 405 aa20.47■□□□□ 0.87
TSPAN4-206ENST00000397408 SP140Q13342 867 aa20.47■□□□□ 0.87
TSPAN4-206ENST00000397408 USP10Q14694 798 aaKnown RBP20.47■□□□□ 0.87
TSPAN4-206ENST00000397408 FAM153CQ494X1 144 aa20.47■□□□□ 0.87
TSPAN4-206ENST00000397408 DLG3Q92796 817 aa20.47■□□□□ 0.87
TSPAN4-206ENST00000397408 TSPAN17Q96FV3 270 aa20.47■□□□□ 0.87
TSPAN4-206ENST00000397408 OR6C1Q96RD1 312 aa20.47■□□□□ 0.87
TSPAN4-206ENST00000397408 FUT8Q9BYC5 575 aa20.47■□□□□ 0.87
TSPAN4-206ENST00000397408 POPDC3Q9HBV1 291 aa20.47■□□□□ 0.87
TSPAN4-206ENST00000397408 FBXO8Q9NRD0 319 aa20.47■□□□□ 0.87
TSPAN4-206ENST00000397408 PCDHGA3Q9Y5H0 932 aa20.47■□□□□ 0.87
TSPAN4-206ENST00000397408 B3GALT1Q9Y5Z6 326 aa20.47■□□□□ 0.87
TSPAN4-206ENST00000397408 SNRNP200O75643 2136 aaKnown RBP20.47■□□□□ 0.87
TSPAN4-206ENST00000397408 URB1O60287 2271 aaKnown RBP20.46■□□□□ 0.87
TSPAN4-206ENST00000397408 A0A0J9YY10 115 aa20.46■□□□□ 0.87
TSPAN4-206ENST00000397408 SLU7O95391 586 aaKnown RBP20.46■□□□□ 0.87
TSPAN4-206ENST00000397408 ERGP11308 486 aa20.46■□□□□ 0.87
TSPAN4-206ENST00000397408 FOLR1P15328 257 aa20.46■□□□□ 0.87
TSPAN4-206ENST00000397408 CYP2A7P20853 494 aa20.46■□□□□ 0.87
TSPAN4-206ENST00000397408 FASTKQ14296 549 aaKnown RBP20.46■□□□□ 0.87
TSPAN4-206ENST00000397408 UAP1Q16222 522 aaPredicted RBP20.46■□□□□ 0.87
TSPAN4-206ENST00000397408 CYP2A13Q16696 494 aa20.46■□□□□ 0.87
TSPAN4-206ENST00000397408 ST3GAL2Q16842 350 aa20.46■□□□□ 0.87
TSPAN4-206ENST00000397408 SLC5A12Q1EHB4 618 aa20.46■□□□□ 0.87
TSPAN4-206ENST00000397408 DCAF12Q5T6F0 453 aa20.46■□□□□ 0.87
TSPAN4-206ENST00000397408 D2HGDHQ8N465 521 aa20.46■□□□□ 0.87
TSPAN4-206ENST00000397408 NKAPQ8N5F7 415 aaKnown RBP20.46■□□□□ 0.87
TSPAN4-206ENST00000397408 UHMK1Q8TAS1 419 aaKnown RBP20.46■□□□□ 0.87
TSPAN4-206ENST00000397408 HMGCLL1Q8TB92 370 aa20.46■□□□□ 0.87
TSPAN4-206ENST00000397408 SLC22A18Q96BI1 424 aa20.46■□□□□ 0.87
TSPAN4-206ENST00000397408 TRAPPC9Q96Q05 1148 aa20.46■□□□□ 0.87
TSPAN4-206ENST00000397408 SYTL2Q9HCH5 934 aa20.46■□□□□ 0.87
TSPAN4-206ENST00000397408 GPAMQ9HCL2 828 aa20.46■□□□□ 0.87
TSPAN4-206ENST00000397408 BTRCQ9Y297 605 aa20.46■□□□□ 0.87
TSPAN4-206ENST00000397408 PCDHB11Q9Y5F2 797 aa20.46■□□□□ 0.87
TSPAN4-206ENST00000397408 EPG5Q9HCE0 2579 aa20.46■□□□□ 0.87
TSPAN4-206ENST00000397408 USP24Q9UPU5 2620 aa20.46■□□□□ 0.87
TSPAN4-206ENST00000397408 POLR1CO15160 346 aaPredicted RBP20.45■□□□□ 0.86
TSPAN4-206ENST00000397408 SLC16A5O15375 505 aa20.45■□□□□ 0.86
TSPAN4-206ENST00000397408 PHGDHO43175 533 aaKnown RBP20.45■□□□□ 0.86
TSPAN4-206ENST00000397408 SLC16A8O95907 504 aa20.45■□□□□ 0.86
TSPAN4-206ENST00000397408 MYBL2P10244 700 aa20.45■□□□□ 0.86
TSPAN4-206ENST00000397408 STMN1P16949 149 aa20.45■□□□□ 0.86
TSPAN4-206ENST00000397408 TUBB3Q13509 450 aa20.45■□□□□ 0.86
TSPAN4-206ENST00000397408 TMTC4Q5T4D3 741 aa20.45■□□□□ 0.86
TSPAN4-206ENST00000397408 CEACAM20Q6UY09 585 aa20.45■□□□□ 0.86
TSPAN4-206ENST00000397408 FAM20CQ8IXL6 584 aa20.45■□□□□ 0.86
TSPAN4-206ENST00000397408 C19orf47Q8N9M1 422 aaKnown RBP20.45■□□□□ 0.86
TSPAN4-206ENST00000397408 EIF1ADQ8N9N8 165 aaKnown RBP20.45■□□□□ 0.86
TSPAN4-206ENST00000397408 ANKRD49Q8WVL7 239 aa20.45■□□□□ 0.86
TSPAN4-206ENST00000397408 SLC12A9Q9BXP2 914 aa20.45■□□□□ 0.86
TSPAN4-206ENST00000397408 ASPSCR1Q9BZE9 553 aa20.45■□□□□ 0.86
TSPAN4-206ENST00000397408 B3GNT4Q9C0J1 378 aa20.45■□□□□ 0.86
TSPAN4-206ENST00000397408 ANKZF1Q9H8Y5 726 aa20.45■□□□□ 0.86
TSPAN4-206ENST00000397408 PARVBQ9HBI1 364 aa20.45■□□□□ 0.86
TSPAN4-206ENST00000397408 PDE10AQ9Y233 779 aa20.45■□□□□ 0.86
TSPAN4-206ENST00000397408 CELSR3Q9NYQ7 3312 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms