RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 FBXL8Q96CD0 374 aa16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 CHMP6Q96FZ7 201 aa16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 CCDC138Q96M89 665 aa16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 PKP4Q99569 1192 aa16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 DRC3Q9H069 523 aa16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 ZNF395Q9H8N7 513 aaPredicted RBP16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 ERVMER34-1Q9H9K5 563 aa16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 KMT2BQ9UMN6 2715 aaPredicted RBP16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 GMNCA6NCL1 334 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 PABPN1LA6NDY0 278 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 OR52A4PA6NMU1 304 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 EDF1O60869 148 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 CBFA2T3O75081 653 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 LYPLA1O75608 230 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 RPN2P04844 631 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 SYPP08247 313 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 F3P13726 295 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 CCR10P46092 362 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 SLC1A6P48664 564 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 HNMTP50135 292 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 ATXN3P54252 364 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 FOXC1Q12948 553 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 C1orf61Q13536 156 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 RCN2Q14257 317 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 TBC1D21Q8IYX1 336 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 LSMEM2Q8N112 164 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 TCAIMQ8N3R3 496 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 MAGEC3Q8TD91 643 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 ZNF483Q8TF39 744 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 ESAMQ96AP7 390 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 TRIT1Q9H3H1 467 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 THAP1Q9NVV9 213 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 WWOXQ9NZC7 414 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 TAAR2Q9P1P5 351 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 PCTPQ9UKL6 214 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 E2F3O00716 465 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 SUPT7LO94864 414 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 VIMP08670 466 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 MTHFD1P11586 935 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 IMPA1P29218 277 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 SERPINB5P36952 375 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 HALP42357 657 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 SLC6A12P48065 614 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 HSPA7P48741 367 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 KIF19Q2TAC6 998 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 HLA-BQ31612 363 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 CFAP157Q5JU67 520 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 ANKS6Q68DC2 871 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 FAM47EQ6ZV65 393 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 TAF8Q7Z7C8 310 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 OR9A1PQ8NGU1 263 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 RAD51AP1Q96B01 352 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 CNDP1Q96KN2 507 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 C7orf26Q96N11 449 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 NSUN5Q96P11 429 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 SORT1Q99523 831 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 CD244Q9BZW8 370 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 EPN3Q9H201 632 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 IMP3Q9NV31 184 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 PSD3Q9NYI0 1048 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 STOX2Q9P2F5 926 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 CIDEBQ9UHD4 219 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 TNPO3Q9Y5L0 923 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 SNX11Q9Y5W9 270 aa16.45■□□□□ 0.22
TSPAN4-205ENST00000397406 PCM1Q15154 2024 aa16.44■□□□□ 0.22
TSPAN4-205ENST00000397406 WDFY3Q8IZQ1 3526 aa16.44■□□□□ 0.22
TSPAN4-205ENST00000397406 SLC16A8O95907 504 aa16.44■□□□□ 0.22
TSPAN4-205ENST00000397406 CHRNGP07510 517 aa16.44■□□□□ 0.22
TSPAN4-205ENST00000397406 HNRNPKP61978 463 aaKnown RBP eCLIP16.44■□□□□ 0.228e-6■■■■□ 19.7
TSPAN4-205ENST00000397406 SIM1P81133 766 aaPredicted RBP16.44■□□□□ 0.22
TSPAN4-205ENST00000397406 ELOCQ15369 112 aa16.44■□□□□ 0.22
TSPAN4-205ENST00000397406 PRAMEF14Q5SWL7 426 aa16.44■□□□□ 0.22
TSPAN4-205ENST00000397406 METTL2BQ6P1Q9 378 aaKnown RBP16.44■□□□□ 0.22
TSPAN4-205ENST00000397406 TTC23LQ6PF05 361 aa16.44■□□□□ 0.22
TSPAN4-205ENST00000397406 IYDQ6PHW0 289 aa16.44■□□□□ 0.22
TSPAN4-205ENST00000397406 DBX2Q6ZNG2 339 aa16.44■□□□□ 0.22
TSPAN4-205ENST00000397406 KLHDC8AQ8IYD2 350 aa16.44■□□□□ 0.22
TSPAN4-205ENST00000397406 ATL1Q8WXF7 558 aa16.44■□□□□ 0.22
TSPAN4-205ENST00000397406 FERD3LQ96RJ6 166 aa16.44■□□□□ 0.22
TSPAN4-205ENST00000397406 HGH1Q9BTY7 390 aa16.44■□□□□ 0.22
TSPAN4-205ENST00000397406 MENTQ9BUN1 341 aa16.44■□□□□ 0.22
TSPAN4-205ENST00000397406 PITPNM3Q9BZ71 974 aa16.44■□□□□ 0.22
TSPAN4-205ENST00000397406 GAREM1Q9H706 876 aa16.44■□□□□ 0.22
TSPAN4-205ENST00000397406 MVB12BQ9H7P6 319 aa16.44■□□□□ 0.22
TSPAN4-205ENST00000397406 ZBTB26Q9HCK0 441 aa16.44■□□□□ 0.22
TSPAN4-205ENST00000397406 FGFR1OP2Q9NVK5 253 aa16.44■□□□□ 0.22
TSPAN4-205ENST00000397406 ZNF624Q9P2J8 865 aaPredicted RBP16.44■□□□□ 0.22
TSPAN4-205ENST00000397406 SPASTQ9UBP0 616 aa16.44■□□□□ 0.22
TSPAN4-205ENST00000397406 HEBP2Q9Y5Z4 205 aa16.44■□□□□ 0.22
TSPAN4-205ENST00000397406 PCNX2A6NKB5 2137 aa16.43■□□□□ 0.22
TSPAN4-205ENST00000397406 MAP1BP46821 2468 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-205ENST00000397406 C1QTNF9BB2RNN3 333 aa16.43■□□□□ 0.22
TSPAN4-205ENST00000397406 HYAL3O43820 417 aaPredicted RBP16.43■□□□□ 0.22
TSPAN4-205ENST00000397406 PIAS2O75928 621 aa16.43■□□□□ 0.22
TSPAN4-205ENST00000397406 C1QTNF9P0C862 333 aa16.43■□□□□ 0.22
TSPAN4-205ENST00000397406 ERGP11308 486 aa16.43■□□□□ 0.22
TSPAN4-205ENST00000397406 DRD4P21917 467 aa16.43■□□□□ 0.22
TSPAN4-205ENST00000397406 GDF5P43026 501 aa16.43■□□□□ 0.22
TSPAN4-205ENST00000397406 CDH13P55290 713 aa16.43■□□□□ 0.22
TSPAN4-205ENST00000397406 NAA20P61599 178 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms