RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 DYRK1BQ9Y463 629 aa11.28□□□□□ -0.6
PDXDC1-202ENST00000396410 INSL6Q9Y581 213 aa11.28□□□□□ -0.6
PDXDC1-202ENST00000396410 U3KQV3 271 aa11.28□□□□□ -0.6
PDXDC1-202ENST00000396410 ASPDHA6ND91 283 aa11.27□□□□□ -0.6
PDXDC1-202ENST00000396410 TTC34A8MYJ7 566 aa11.27□□□□□ -0.6
PDXDC1-202ENST00000396410 UPK3BL1B0FP48 263 aa11.27□□□□□ -0.6
PDXDC1-202ENST00000396410 UPK3BL2E5RIL1 263 aa11.27□□□□□ -0.6
PDXDC1-202ENST00000396410 C1SP09871 688 aa11.27□□□□□ -0.6
PDXDC1-202ENST00000396410 LHCGRP22888 699 aa11.27□□□□□ -0.6
PDXDC1-202ENST00000396410 DDX6P26196 483 aaKnown RBP eCLIP11.27□□□□□ -0.63e-7■■■■■ 34.3
PDXDC1-202ENST00000396410 DMC1Q14565 340 aa11.27□□□□□ -0.6
PDXDC1-202ENST00000396410 ZCCHC8Q6NZY4 707 aaKnown RBP11.27□□□□□ -0.6
PDXDC1-202ENST00000396410 C8orf59Q8N0T1 100 aaPredicted RBP11.27□□□□□ -0.6
PDXDC1-202ENST00000396410 GPR156Q8NFN8 814 aa11.27□□□□□ -0.6
PDXDC1-202ENST00000396410 CSGALNACT1Q8TDX6 532 aa11.27□□□□□ -0.6
PDXDC1-202ENST00000396410 UHRF1Q96T88 793 aaPredicted RBP11.27□□□□□ -0.6
PDXDC1-202ENST00000396410 SLC12A9Q9BXP2 914 aa11.27□□□□□ -0.6
PDXDC1-202ENST00000396410 SGK2Q9HBY8 427 aa11.27□□□□□ -0.6
PDXDC1-202ENST00000396410 PADI4Q9UM07 663 aa11.27□□□□□ -0.6
PDXDC1-202ENST00000396410 PRRC2BQ5JSZ5 2229 aaKnown RBP11.27□□□□□ -0.6
PDXDC1-202ENST00000396410 TRBV5-4A0A0C4DH59 114 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 GRXCR2A6NFK2 248 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 ERN1O75460 977 aaKnown RBP11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 MYCLP1P12525 358 aaPredicted RBP11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 PSMA3P25788 255 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 CA5AP35218 305 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 DGKGP49619 791 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 HIST2H2ACQ16777 129 aaPredicted RBP11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 SLC44A4Q53GD3 710 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 HIST2H2AA3Q6FI13 130 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 RBM23Q86U06 439 aaKnown RBP11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 MICU2Q8IYU8 434 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 LEMD2Q8NC56 503 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 ZFP28Q8NHY6 868 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 ZFAND2BQ8WV99 257 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 TFAP2CQ92754 450 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 AURKBQ96GD4 344 aaPredicted RBP11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 ZSCAN5AQ9BUG6 496 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 BLOC1S6Q9UL45 172 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 GAPDHSO14556 408 aaPredicted RBP11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 PRKD3O94806 890 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 SNAP29O95721 258 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 SERPINA1P01009 418 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 ABCB1P08183 1280 aaPredicted RBP11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 THRBP10828 461 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 CLCN2P51788 898 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 SP140Q13342 867 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 SPIDRQ14159 915 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 RAET1GQ6H3X3 334 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 TMEM220Q6QAJ8 160 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 SERPINA13PQ6UXR4 307 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 CARM1Q86X55 608 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 PTRH1Q86Y79 214 aaKnown RBP11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 ZCCHC2Q9C0B9 1178 aaKnown RBP11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 POLR1BQ9H9Y6 1135 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 DNMT3BQ9UBC3 853 aaKnown RBP11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 GNAO1P09471 354 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 MPC1LP0DKB6 136 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 BMP1P13497 986 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 GGT1P19440 569 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 FOXD4Q12950 439 aaPredicted RBP11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 TTC23Q5W5X9 447 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 OR4F3Q6IEY1 312 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 DCUN1D5Q9BTE7 237 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 MTG2Q9H4K7 406 aa11.27□□□□□ -0.61
PDXDC1-202ENST00000396410 FPGTO14772 594 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 RSL1D1O76021 490 aaKnown RBP11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 AOAHP28039 575 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 RAD23AP54725 363 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 GTDC1Q4AE62 458 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 LDLRAP1Q5SW96 308 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 METTL2BQ6P1Q9 378 aaKnown RBP11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 DOK6Q6PKX4 331 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 TMEM26Q6ZUK4 368 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 GRASPQ7Z6J2 395 aaPredicted RBP11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 DNAJB8Q8NHS0 232 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 THAP11Q96EK4 314 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 CMTM7Q96FZ5 175 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 TMEM106CQ9BVX2 250 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 ACPTQ9BZG2 426 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 SPASTQ9UBP0 616 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 KCNE2Q9Y6J6 123 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 COL4A4P53420 1690 aaPredicted RBP11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 H3BM21 787 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 PLOD2O00469 737 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 NOBOXO60393 691 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 GPR1P46091 355 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 PREPP48147 710 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 LAPTM5Q13571 262 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 DAG1Q14118 895 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 NECAB2Q7Z6G3 386 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 PNPT1Q8TCS8 783 aaKnown RBP11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 POF1BQ8WVV4 589 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 SH3KBP1Q96B97 665 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 DUS2Q9NX74 493 aaKnown RBP11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 DNAJB9Q9UBS3 223 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 YBX1P67809 324 aaKnown RBP11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 NTHL1P78549 312 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 EPS8Q12929 822 aa11.26□□□□□ -0.61
PDXDC1-202ENST00000396410 PPP1R8Q12972 351 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms