RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 ZSWIM3Q96MP5 696 aa16.36■□□□□ 0.21
NUP50-202ENST00000396096 HHIPQ96QV1 700 aa16.36■□□□□ 0.21
NUP50-202ENST00000396096 ELOVL6Q9H5J4 265 aa16.36■□□□□ 0.21
NUP50-202ENST00000396096 PIF1Q9H611 641 aa16.36■□□□□ 0.21
NUP50-202ENST00000396096 CD320Q9NPF0 282 aa16.36■□□□□ 0.21
NUP50-202ENST00000396096 SLC25A37Q9NYZ2 338 aa16.36■□□□□ 0.21
NUP50-202ENST00000396096 NUP210Q8TEM1 1887 aaPredicted RBP16.36■□□□□ 0.21
NUP50-202ENST00000396096 RNF103-CHMP3A0A140T963 221 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 EME2A4GXA9 379 aaPredicted RBP16.35■□□□□ 0.21
NUP50-202ENST00000396096 UGDHO60701 494 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 ERN1O75460 977 aaKnown RBP16.35■□□□□ 0.21
NUP50-202ENST00000396096 OR6B1O95007 311 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 ASLP04424 464 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 RAP2AP10114 183 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 SYN1P17600 705 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 ETV3P41162 512 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 UBE3AQ05086 875 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 LDLRAP1Q5SW96 308 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 ISLR2Q6UXK2 745 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 FKBP9P1Q75LS8 142 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 KIAA1958Q8N8K9 716 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 OR2T12Q8NG77 320 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 BTN2A2Q8WVV5 523 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 MYLIPQ8WY64 445 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 TESCQ96BS2 214 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 RMND5BQ96G75 393 aaPredicted RBP16.35■□□□□ 0.21
NUP50-202ENST00000396096 OR52E6Q96RD3 313 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 BDH2Q9BUT1 245 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 RIOK2Q9BVS4 552 aaKnown RBP16.35■□□□□ 0.21
NUP50-202ENST00000396096 OSBPL6Q9BZF3 934 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 KCNH6Q9H252 994 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 DLGAP4Q9Y2H0 992 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 A0A096LPI6 279 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 FADS2P1A8MWK0 482 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 AREL1O15033 823 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 VILLO15195 856 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 PRAMEF4O60810 478 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 MTX2O75431 263 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 PSIP1O75475 530 aaKnown RBP16.35■□□□□ 0.21
NUP50-202ENST00000396096 POU2F2P09086 479 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 CISD3P0C7P0 127 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 JUPP14923 745 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 ATP6V1B1P15313 513 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 ZNF23P17027 643 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 HOXB9P17482 250 aaPredicted RBP16.35■□□□□ 0.21
NUP50-202ENST00000396096 MMP12P39900 470 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 SH3BGRP55822 239 aaPredicted RBP16.35■□□□□ 0.21
NUP50-202ENST00000396096 PFN3P60673 137 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 TUBA4AP68366 448 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 NTHL1P78549 312 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 KCTD21Q4G0X4 260 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 PRAMEF9Q5VWM5 478 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 ATG9BQ674R7 924 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 MSANTD1Q6ZTZ1 278 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 NAT16Q8N8M0 369 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 SPDYE1Q8NFV5 336 aaPredicted RBP16.35■□□□□ 0.21
NUP50-202ENST00000396096 ITFG1Q8TB96 612 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 WFIKKN2Q8TEU8 576 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 SORCS1Q8WY21 1168 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 MTFMTQ96DP5 389 aaKnown RBP16.35■□□□□ 0.21
NUP50-202ENST00000396096 RNF145Q96MT1 663 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 SEPHS2Q99611 448 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 GRIP2Q9C0E4 1043 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 PAIP1Q9H074 479 aaKnown RBP16.35■□□□□ 0.21
NUP50-202ENST00000396096 CXXC1Q9P0U4 656 aaPredicted RBP16.35■□□□□ 0.21
NUP50-202ENST00000396096 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.35■□□□□ 0.21
NUP50-202ENST00000396096 HCFC2Q9Y5Z7 792 aa16.35■□□□□ 0.21
NUP50-202ENST00000396096 EI24O14681 340 aa16.34■□□□□ 0.21
NUP50-202ENST00000396096 CLOCKO15516 846 aa16.34■□□□□ 0.21
NUP50-202ENST00000396096 GMNNO75496 209 aa16.34■□□□□ 0.21
NUP50-202ENST00000396096 SCELO95171 688 aa16.34■□□□□ 0.21
NUP50-202ENST00000396096 EPCAMP16422 314 aa16.34■□□□□ 0.21
NUP50-202ENST00000396096 PHC1P78364 1004 aa16.34■□□□□ 0.21
NUP50-202ENST00000396096 PCDH1Q08174 1060 aa16.34■□□□□ 0.21
NUP50-202ENST00000396096 ZNF284Q2VY69 593 aa16.34■□□□□ 0.21
NUP50-202ENST00000396096 PLA2G4EQ3MJ16 856 aa16.34■□□□□ 0.21
NUP50-202ENST00000396096 FAM98BQ52LJ0 330 aaKnown RBP16.34■□□□□ 0.21
NUP50-202ENST00000396096 THEMIS2Q5TEJ8 643 aa16.34■□□□□ 0.21
NUP50-202ENST00000396096 LIPJQ5W064 366 aa16.34■□□□□ 0.21
NUP50-202ENST00000396096 FRG2Q64ET8 278 aa16.34■□□□□ 0.21
NUP50-202ENST00000396096 CALHM3Q86XJ0 350 aa16.34■□□□□ 0.21
NUP50-202ENST00000396096 RAVER1Q8IY67 606 aaKnown RBP16.34■□□□□ 0.21
NUP50-202ENST00000396096 NRSN1Q8IZ57 195 aa16.34■□□□□ 0.21
NUP50-202ENST00000396096 BEND7Q8N7W2 519 aaPredicted RBP16.34■□□□□ 0.21
NUP50-202ENST00000396096 FAM47BQ8NA70 645 aa16.34■□□□□ 0.21
NUP50-202ENST00000396096 GLMNQ92990 594 aa16.34■□□□□ 0.21
NUP50-202ENST00000396096 FRG2BQ96QU4 278 aa16.34■□□□□ 0.21
NUP50-202ENST00000396096 TRIM4Q9C037 500 aa16.34■□□□□ 0.21
NUP50-202ENST00000396096 IKZF5Q9H5V7 419 aa16.34■□□□□ 0.21
NUP50-202ENST00000396096 CLK4Q9HAZ1 481 aaKnown RBP16.34■□□□□ 0.21
NUP50-202ENST00000396096 SERHLQ9NQF3 203 aa16.34■□□□□ 0.21
NUP50-202ENST00000396096 SMPD3Q9NY59 655 aaPredicted RBP16.34■□□□□ 0.21
NUP50-202ENST00000396096 SLC22A14Q9Y267 594 aa16.34■□□□□ 0.21
NUP50-202ENST00000396096 CROCCQ5TZA2 2017 aa16.33■□□□□ 0.21
NUP50-202ENST00000396096 A0A1B0GTW7 788 aa16.33■□□□□ 0.21
NUP50-202ENST00000396096 TRIM64A6NGJ6 449 aa16.33■□□□□ 0.21
NUP50-202ENST00000396096 TRIM64CA6NLI5 447 aa16.33■□□□□ 0.21
NUP50-202ENST00000396096 C16orf96A6NNT2 1141 aa16.33■□□□□ 0.21
NUP50-202ENST00000396096 FAM220BPB1ANY3 271 aa16.33■□□□□ 0.21
NUP50-202ENST00000396096 PSMD11O00231 422 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms