RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 ANXA2P07355 339 aaKnown RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 ADH5P11766 374 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 ITGA3P26006 1051 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 PLA2G16P53816 162 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 SLC10A7Q0GE19 358 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 IQCCQ4KMZ1 466 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 C10orf62Q5T681 223 aaPredicted RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 CNKSR3Q6P9H4 555 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 GALNTL5Q7Z4T8 443 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 CBR4Q8N4T8 237 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 GPR151Q8TDV0 419 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 GTPBP3Q969Y2 492 aaKnown RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 TLCD1Q96CP7 247 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 MTERF1Q99551 399 aaKnown RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 EBPLQ9BY08 206 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 TBL1XR1Q9BZK7 514 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 WDR26Q9H7D7 661 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 FANCFQ9NPI8 374 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 OXSMQ9NWU1 459 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 TCRBV7S2A1N4TA0A589 114 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 FBXO43Q4G163 708 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 CLEC20AQ6ZU45 233 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 PIGWQ7Z7B1 504 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 NUDT13Q86X67 352 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 TRIM39Q9HCM9 518 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 KDM3BQ7LBC6 1761 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 SOWAHBA6NEL2 793 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 AQP12BA6NM10 295 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 VSTM5A8MXK1 200 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 EFCAB9A8MZ26 197 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 SOCS5O75159 536 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 AGXTP21549 392 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 CPN2P22792 545 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 DNAJA1P31689 397 aaKnown RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 TAS2R39P59534 338 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 CBX3Q13185 183 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 FAM43BQ6ZT52 329 aaPredicted RBP5.35□□□□□ -1.55
VPS13C-204ENST00000395898 AQP12AQ8IXF9 295 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 HPS1Q92902 700 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 MED28Q9H204 178 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 GDAP2Q9NXN4 497 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 EURLQ9NYK6 297 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 MOCS1Q9NZB8 636 aa5.35□□□□□ -1.55
VPS13C-204ENST00000395898 ARVCFO00192 962 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 SLC22A1O15245 554 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 PFKMP08237 780 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 CHRNB2P17787 502 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 PTGIRP43119 386 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 KCNC3Q14003 757 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 SOWAHAQ2M3V2 549 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 KLHL26Q53HC5 615 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 CRB2Q5IJ48 1285 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 VWA5B1Q5TIE3 1220 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 SIX5Q8N196 739 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 CHST4Q8NCG5 386 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 TFAP2BQ92481 460 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 PIWIL1Q96J94 861 aaKnown RBP5.34□□□□□ -1.55
VPS13C-204ENST00000395898 C1orf21Q9H246 121 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 MCCC2Q9HCC0 563 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 LYARQ9NX58 379 aaKnown RBP5.34□□□□□ -1.55
VPS13C-204ENST00000395898 ZNF221Q9UK13 617 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 ERVK-11Q9UQG0 969 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 SHROOM3Q8TF72 1996 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 A0A1W2PRB8 838 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 C9J4A7 227 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 INHAP05111 366 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 GSTM3P21266 225 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 RFC2P35250 354 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 NCBP2P52298 156 aaKnown RBP eCLIP5.34□□□□□ -1.552e-6■□□□□ 9.3
VPS13C-204ENST00000395898 ZNF460Q14592 562 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 PDGFRLQ15198 375 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 TIGD5Q53EQ6 642 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 FRG2Q64ET8 278 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 SMARCD3Q6STE5 483 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 OR2L3Q8NG85 312 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 THRSPQ92748 146 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 FRG2BQ96QU4 278 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 NDC1Q9BTX1 674 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 CYP11A1P05108 521 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 BMP8BP34820 402 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 CSKP41240 450 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 SMSP52788 366 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 FOXM1Q08050 763 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 HERC3Q15034 1050 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 BMP8AQ7Z5Y6 402 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 OR2AJ1Q8NGZ0 328 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 ZIM2Q9NZV7 527 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 DGKBQ9Y6T7 804 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 IGKV6D-41A0A0C4DH26 115 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 EDDM13A0A1B0GTR0 161 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 GMFGO60234 142 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 ZNF432O94892 652 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 PGRP06401 933 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 ATP1B2P14415 290 aaPredicted RBP5.34□□□□□ -1.55
VPS13C-204ENST00000395898 ZNF280AP59817 542 aaPredicted RBP5.34□□□□□ -1.55
VPS13C-204ENST00000395898 EOGTQ5NDL2 527 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 ANKRD22Q5VYY1 191 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 IFNL1Q8IU54 200 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 OR10H4Q8NGA5 316 aa5.34□□□□□ -1.55
VPS13C-204ENST00000395898 OR5K1Q8NHB7 308 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms