RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 IPPKQ9H8X2 491 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 DNAJC11Q9NVH1 559 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 GPRC5BQ9NZH0 403 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 KLF15Q9UIH9 416 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 PNMA8BQ9ULN7 279 aaPredicted RBP13.29□□□□□ -0.28
VAPB-202ENST00000395802 KCNE2Q9Y6J6 123 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 TRPC5OSA6NMA1 111 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 SCAMP1O15126 338 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 YKT6O15498 198 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 CHRNGP07510 517 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 FGF4P08620 206 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 EBLN1P0CF75 366 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 XRCC1P18887 633 aaPredicted RBP13.29□□□□□ -0.28
VAPB-202ENST00000395802 IMPA1P29218 277 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 SRSF5Q13243 272 aaKnown RBP13.29□□□□□ -0.28
VAPB-202ENST00000395802 DUOXA1Q1HG43 343 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 SH2D4BQ5SQS7 431 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 IYDQ6PHW0 289 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 MBOAT1Q6ZNC8 495 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 GPRIN3Q6ZVF9 776 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 GOLGA7Q7Z5G4 137 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 YTHDF3Q7Z739 585 aaKnown RBP13.29□□□□□ -0.28
VAPB-202ENST00000395802 NRROSQ86YC3 692 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 ZNF781Q8N8C0 355 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 OR56A3Q8NH54 315 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 CCL4L1Q8NHW4 92 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 SETD7Q8WTS6 366 aaKnown RBP13.29□□□□□ -0.28
VAPB-202ENST00000395802 ZNF480Q8WV37 535 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 PIGKQ92643 395 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 MED8Q96G25 268 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 LOXL4Q96JB6 756 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 CCT7Q99832 543 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 NTMT1Q9BV86 223 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 ATG10Q9H0Y0 220 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 KIR3DX1Q9H7L2 352 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 NOL11Q9H8H0 719 aaKnown RBP13.29□□□□□ -0.28
VAPB-202ENST00000395802 KCNK13Q9HB14 408 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 CCDC177Q9NQR7 707 aaPredicted RBP13.29□□□□□ -0.28
VAPB-202ENST00000395802 KCNK4Q9NYG8 393 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 ST14Q9Y5Y6 855 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 CFAP20Q9Y6A4 193 aaKnown RBP13.29□□□□□ -0.28
VAPB-202ENST00000395802 A6NCN8 305 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 OR52A4PA6NMU1 304 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 HDAC3O15379 428 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 AQP9O43315 295 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 GALR2O43603 387 aaPredicted RBP13.28□□□□□ -0.28
VAPB-202ENST00000395802 UGDHO60701 494 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 VIPP01282 170 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 ENO1P06733 434 aaKnown RBP13.28□□□□□ -0.28
VAPB-202ENST00000395802 KITP10721 976 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 GNAZP19086 355 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 SHMT2P34897 504 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 CDC16Q13042 620 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 PRKG2Q13237 762 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 NAE1Q13564 534 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 GLIPR1L2Q4G1C9 344 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 MILR1Q7Z6M3 343 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 LSMEM2Q8N112 164 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 SNX31Q8N9S9 440 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 FAM46DQ8NEK8 389 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 RFWD2Q8NHY2 731 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 SMPDL3AQ92484 453 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 ESAMQ96AP7 390 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 SH3KBP1Q96B97 665 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 HAUS8Q9BT25 410 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 APOBEC2Q9Y235 224 aaKnown RBP13.28□□□□□ -0.28
VAPB-202ENST00000395802 SLC22A14Q9Y267 594 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 TRAF6Q9Y4K3 522 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 CSNK1G3Q9Y6M4 447 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 USH1CQ9Y6N9 552 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 SPAG17Q6Q759 2223 aa13.28□□□□□ -0.28
VAPB-202ENST00000395802 A0A1B0GVT2 93 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 E7ENX8 843 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 LMO7DNF2Z398 122 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 CLGNO14967 610 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 AZIN1O14977 448 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 GPR37L1O60883 481 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 ANXA6P08133 673 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 ERGP11308 486 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 GDF5P43026 501 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 CTSKP43235 329 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 RXRGP48443 463 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 SH3BP2P78314 561 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 TAP2Q03519 686 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 CYP2A13Q16696 494 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 CCSMST1Q4G0I0 132 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 FBXO48Q5FWF7 155 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 LAYNQ6UX15 382 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 TRPM8Q7Z2W7 1104 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 THOC6Q86W42 341 aaKnown RBP13.27□□□□□ -0.28
VAPB-202ENST00000395802 HMGCLL1Q8TB92 370 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 LMX1AQ8TE12 382 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 AGAP11Q8TF27 550 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 ZDHHC1Q8WTX9 485 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 CCT6BQ92526 530 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 CAMK1GQ96NX5 476 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 NSUN5Q96P11 429 aaKnown RBP13.27□□□□□ -0.28
VAPB-202ENST00000395802 ELF4Q99607 663 aaPredicted RBP13.27□□□□□ -0.28
VAPB-202ENST00000395802 TCEAL2Q9H3H9 227 aaPredicted RBP13.27□□□□□ -0.28
VAPB-202ENST00000395802 ABCF3Q9NUQ8 709 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms