RNA–Protein interactions for RNA: ENST00000395366.2

PPP1CB-203, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 4,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-203ENST00000395366 LRIG1Q96JA1 1093 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 SPATA5L1Q9BVQ7 753 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 CHID1Q9BWS9 393 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 COQ10BQ9H8M1 238 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 CLDND1Q9NY35 253 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 EURLQ9NYK6 297 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 SPIBQ01892 262 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 EMX2Q04743 252 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 SLC5A9Q2M3M2 681 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 ASRGL1Q7L266 308 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 SYVN1Q86TM6 617 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 C11orf65Q8NCR3 313 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 EXOSC8Q96B26 276 aaKnown RBP14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 WDR83Q9BRX9 315 aaKnown RBP14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 DUSP26Q9BV47 211 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 SLC2A11Q9BYW1 496 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 POLR1BQ9H9Y6 1135 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 MEAF6Q9HAF1 191 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 LRRC72A6NJI9 287 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 LIN7AO14910 233 aaPredicted RBP14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 GJB3O75712 270 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 ADARP55265 1226 aaKnown RBP14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 BLMHQ13867 455 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 MBTPS1Q14703 1052 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 ATP13A5Q4VNC0 1218 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 PLEKHS1Q5SXH7 462 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 C16orf62Q7Z3J2 963 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 CDK20Q8IZL9 346 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 SCRN2Q96FV2 425 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 ZFYVE19Q96K21 471 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 LINC00597Q9H2U6 94 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 HSFX1Q9UBD0 423 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 COQ6Q9Y2Z9 468 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 MAP4K5Q9Y4K4 846 aa14.36□□□□□ -0.11
PPP1CB-203ENST00000395366 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 TRIM43BA6NCK2 446 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 SERPINB7O75635 380 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 AP2A2O94973 939 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 VIPP01282 170 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 HOXC13P31276 330 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 RPS9P46781 194 aaKnown RBP14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 GSK3BP49841 420 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 RPS7P62081 194 aaKnown RBP14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 GRSF1Q12849 480 aaKnown RBP eCLIP14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 GRB7Q14451 532 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 LRRTM4Q86VH4 590 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 CNTN4Q8IWV2 1026 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.35□□□□□ -0.116e-10■■■□□ 15.5
PPP1CB-203ENST00000395366 KDM1BQ8NB78 822 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 MDGA1Q8NFP4 955 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 GPR150Q8NGU9 434 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 LCN9Q8WX39 176 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 PCBD2Q9H0N5 130 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 RERGLQ9H628 205 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 SMPD3Q9NY59 655 aaPredicted RBP14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 PTGDR2Q9Y5Y4 395 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 ZNF780BQ9Y6R6 833 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 SAP18O00422 153 aaKnown RBP14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 SLC28A2O43868 658 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 PCDH7O60245 1069 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 ERN1O75460 977 aaKnown RBP14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 PDE9AO76083 593 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 APOA1P02647 267 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 S100A1P23297 94 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 CTGFP29279 349 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 VIPR2P41587 438 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 TOP3AQ13472 1001 aaPredicted RBP14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 BROXQ5VW32 411 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 SORT1Q99523 831 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 BOCQ9BWV1 1114 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 SOHLH2Q9NX45 425 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 SAGE1Q9NXZ1 904 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 ARPC2O15144 300 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 BCL10O95999 233 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 MSL3P1P0C860 447 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 TTKP33981 857 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 ACADVLP49748 655 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 ATP4BP51164 291 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 ILF3Q12906 894 aaKnown RBP eCLIP14.35□□□□□ -0.117e-7■■□□□ 13.2
PPP1CB-203ENST00000395366 DLG1Q12959 904 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 SP140Q13342 867 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 GNA13Q14344 377 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 PIANPQ8IYJ0 282 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 SRFBP1Q8NEF9 429 aaKnown RBP14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 DNAJB8Q8NHS0 232 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 ZNF607Q96SK3 696 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 ZNF334Q9HCZ1 680 aaPredicted RBP14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 TGFB1P01137 390 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 C9orf64Q5T6V5 341 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 TMEM214Q6NUQ4 689 aaKnown RBP14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 EIF3MQ7L2H7 374 aaKnown RBP14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 GALNT15Q8N3T1 639 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 CHST14Q8NCH0 376 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 GLYATL1Q969I3 302 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 FUBP1Q96AE4 644 aaKnown RBP14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 PTERQ96BW5 349 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 SLC46A2Q9BY10 475 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 KCNK13Q9HB14 408 aa14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 NDRG2Q9UN36 371 aaKnown RBP14.35□□□□□ -0.11
PPP1CB-203ENST00000395366 DNAJC15Q9Y5T4 150 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms